Gene : Carub.0006s1182 C. rubella v1.1
Defline:  (1 of 16) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  1182
Name:  ? Carub.0006s1182 Secondary Identifier:  ? PAC:39248622
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1182 0.5kb upstream 0.5kb upstream 3488 true scaffold_6: 4394743-4398230 Capsella rubella
Carub.0006s1182 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4394743-4395242 Capsella rubella
Carub.0006s1182 0.5kb downstream 0.5kb downstream 3488 true scaffold_6: 4395243-4398730 Capsella rubella
Carub.0006s1182 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4398231-4398730 Capsella rubella
Carub.0006s1182 1.0kb upstream 1.0kb upstream 3988 true scaffold_6: 4394243-4398230 Capsella rubella
Carub.0006s1182 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4394243-4395242 Capsella rubella
Carub.0006s1182 1.0kb downstream 1.0kb downstream 3988 true scaffold_6: 4395243-4399230 Capsella rubella
Carub.0006s1182 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4398231-4399230 Capsella rubella
Carub.0006s1182 2.0kb upstream 2.0kb upstream 4988 true scaffold_6: 4393243-4398230 Capsella rubella
Carub.0006s1182 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4393243-4395242 Capsella rubella
Carub.0006s1182 2.0kb downstream 2.0kb downstream 4988 true scaffold_6: 4395243-4400230 Capsella rubella
Carub.0006s1182 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4398231-4400230 Capsella rubella
Carub.0006s1182 5.0kb upstream 5.0kb upstream 7988 true scaffold_6: 4390243-4398230 Capsella rubella
Carub.0006s1182 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4390243-4395242 Capsella rubella
Carub.0006s1182 5.0kb downstream 5.0kb downstream 7988 true scaffold_6: 4395243-4403230 Capsella rubella
Carub.0006s1182 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4398231-4403230 Capsella rubella
Carub.0006s1182 10.0kb upstream 10.0kb upstream 12988 true scaffold_6: 4385243-4398230 Capsella rubella
Carub.0006s1182 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4385243-4395242 Capsella rubella
Carub.0006s1182 10.0kb downstream 10.0kb downstream 12988 true scaffold_6: 4395243-4408230 Capsella rubella
Carub.0006s1182 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4398231-4408230 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363746 5261 Brassicaceae View MSA
123838256 5264 Brassicales-Malvales View MSA
124351593 5266 SBM View MSA
124244073 5268 Malvidae View MSA
124072132 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain