Gene : Carub.0007s3565 C. rubella v1.1
Defline:  (1 of 5) PTHR23070//PTHR23070:SF5 - BCS1 AAA-TYPE ATPASE // AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  3565
Name:  ? Carub.0007s3565 Secondary Identifier:  ? PAC:39233107
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3565 0.5kb upstream 0.5kb upstream 2039 true scaffold_7: 16273678-16275716 Capsella rubella
Carub.0007s3565 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 16273678-16274177 Capsella rubella
Carub.0007s3565 0.5kb downstream 0.5kb downstream 2039 true scaffold_7: 16274178-16276216 Capsella rubella
Carub.0007s3565 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 16275717-16276216 Capsella rubella
Carub.0007s3565 1.0kb upstream 1.0kb upstream 2539 true scaffold_7: 16273178-16275716 Capsella rubella
Carub.0007s3565 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 16273178-16274177 Capsella rubella
Carub.0007s3565 1.0kb downstream 1.0kb downstream 2539 true scaffold_7: 16274178-16276716 Capsella rubella
Carub.0007s3565 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 16275717-16276716 Capsella rubella
Carub.0007s3565 2.0kb upstream 2.0kb upstream 3539 true scaffold_7: 16272178-16275716 Capsella rubella
Carub.0007s3565 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 16272178-16274177 Capsella rubella
Carub.0007s3565 2.0kb downstream 2.0kb downstream 3539 true scaffold_7: 16274178-16277716 Capsella rubella
Carub.0007s3565 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 16275717-16277716 Capsella rubella
Carub.0007s3565 5.0kb upstream 5.0kb upstream 6539 true scaffold_7: 16269178-16275716 Capsella rubella
Carub.0007s3565 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 16269178-16274177 Capsella rubella
Carub.0007s3565 5.0kb downstream 5.0kb downstream 6539 true scaffold_7: 16274178-16280716 Capsella rubella
Carub.0007s3565 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 16275717-16280716 Capsella rubella
Carub.0007s3565 10.0kb upstream 10.0kb upstream 11539 true scaffold_7: 16264178-16275716 Capsella rubella
Carub.0007s3565 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 16264178-16274177 Capsella rubella
Carub.0007s3565 10.0kb downstream 10.0kb downstream 11539 true scaffold_7: 16274178-16285716 Capsella rubella
Carub.0007s3565 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 16275717-16285716 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122374032 5261 Brassicaceae View MSA
123838716 5264 Brassicales-Malvales View MSA
124341066 5266 SBM View MSA
124247852 5268 Malvidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain