Gene : Carub.0007s3389 C. rubella v1.1
Defline:  (1 of 2) K04706 - E3 SUMO-protein ligase PIAS1 (PIAS1) Genomic Order:  3389
Name:  ? Carub.0007s3389 Secondary Identifier:  ? PAC:39235516
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3389 0.5kb upstream 0.5kb upstream 4909 true scaffold_7: 15471029-15475937 Capsella rubella
Carub.0007s3389 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 15471029-15471528 Capsella rubella
Carub.0007s3389 0.5kb downstream 0.5kb downstream 4909 true scaffold_7: 15471529-15476437 Capsella rubella
Carub.0007s3389 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 15475938-15476437 Capsella rubella
Carub.0007s3389 1.0kb upstream 1.0kb upstream 5409 true scaffold_7: 15470529-15475937 Capsella rubella
Carub.0007s3389 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 15470529-15471528 Capsella rubella
Carub.0007s3389 1.0kb downstream 1.0kb downstream 5409 true scaffold_7: 15471529-15476937 Capsella rubella
Carub.0007s3389 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 15475938-15476937 Capsella rubella
Carub.0007s3389 2.0kb upstream 2.0kb upstream 6409 true scaffold_7: 15469529-15475937 Capsella rubella
Carub.0007s3389 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 15469529-15471528 Capsella rubella
Carub.0007s3389 2.0kb downstream 2.0kb downstream 6409 true scaffold_7: 15471529-15477937 Capsella rubella
Carub.0007s3389 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 15475938-15477937 Capsella rubella
Carub.0007s3389 5.0kb upstream 5.0kb upstream 9409 true scaffold_7: 15466529-15475937 Capsella rubella
Carub.0007s3389 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 15466529-15471528 Capsella rubella
Carub.0007s3389 5.0kb downstream 5.0kb downstream 9409 true scaffold_7: 15471529-15480937 Capsella rubella
Carub.0007s3389 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 15475938-15480937 Capsella rubella
Carub.0007s3389 10.0kb upstream 10.0kb upstream 14409 true scaffold_7: 15461529-15475937 Capsella rubella
Carub.0007s3389 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 15461529-15471528 Capsella rubella
Carub.0007s3389 10.0kb downstream 10.0kb downstream 14409 true scaffold_7: 15471529-15485937 Capsella rubella
Carub.0007s3389 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 15475938-15485937 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374989 5261 Brassicaceae View MSA
123828908 5264 Brassicales-Malvales View MSA
124339563 5266 SBM View MSA
124238247 5268 Malvidae View MSA
124062957 5270 Rosid View MSA
123737680 5271 Pentapetalae View MSA
122797749 5272 Eudicot View MSA
122050924 5273 Angiosperm View MSA
121346660 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain