Gene : Carub.0007s3460 C. rubella v1.1
Defline:  (1 of 9) PTHR24015//PTHR24015:SF419 - FAMILY NOT NAMED // NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3460
Name:  ? Carub.0007s3460 Secondary Identifier:  ? PAC:39235686
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3460 0.5kb upstream 0.5kb upstream 2543 true scaffold_7: 15785913-15788455 Capsella rubella
Carub.0007s3460 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 15787956-15788455 Capsella rubella
Carub.0007s3460 0.5kb downstream 0.5kb downstream 2543 true scaffold_7: 15785413-15787955 Capsella rubella
Carub.0007s3460 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 15785413-15785912 Capsella rubella
Carub.0007s3460 1.0kb upstream 1.0kb upstream 3043 true scaffold_7: 15785913-15788955 Capsella rubella
Carub.0007s3460 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 15787956-15788955 Capsella rubella
Carub.0007s3460 1.0kb downstream 1.0kb downstream 3043 true scaffold_7: 15784913-15787955 Capsella rubella
Carub.0007s3460 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 15784913-15785912 Capsella rubella
Carub.0007s3460 2.0kb upstream 2.0kb upstream 4043 true scaffold_7: 15785913-15789955 Capsella rubella
Carub.0007s3460 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 15787956-15789955 Capsella rubella
Carub.0007s3460 2.0kb downstream 2.0kb downstream 4043 true scaffold_7: 15783913-15787955 Capsella rubella
Carub.0007s3460 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 15783913-15785912 Capsella rubella
Carub.0007s3460 5.0kb upstream 5.0kb upstream 7043 true scaffold_7: 15785913-15792955 Capsella rubella
Carub.0007s3460 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 15787956-15792955 Capsella rubella
Carub.0007s3460 5.0kb downstream 5.0kb downstream 7043 true scaffold_7: 15780913-15787955 Capsella rubella
Carub.0007s3460 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 15780913-15785912 Capsella rubella
Carub.0007s3460 10.0kb upstream 10.0kb upstream 12043 true scaffold_7: 15785913-15797955 Capsella rubella
Carub.0007s3460 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 15787956-15797955 Capsella rubella
Carub.0007s3460 10.0kb downstream 10.0kb downstream 12043 true scaffold_7: 15775913-15787955 Capsella rubella
Carub.0007s3460 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 15775913-15785912 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378703 5261 Brassicaceae View MSA
123801961 5264 Brassicales-Malvales View MSA
124346915 5266 SBM View MSA
124180927 5268 Malvidae View MSA
124072504 5270 Rosid View MSA
123743110 5271 Pentapetalae View MSA
122789265 5272 Eudicot View MSA
122042337 5273 Angiosperm View MSA
121347291 5274 Embryophyte View MSA
123428374 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain