Gene : Carub.0007s3244 C. rubella v1.1

Defline:  (1 of 3) PTHR10766//PTHR10766:SF58 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3244
Name:  ? Carub.0007s3244 Secondary Identifier:  ? PAC:39234293

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3244 0.5kb upstream 0.5kb upstream 4347 true scaffold_7: 14675116-14679462 Capsella rubella
Carub.0007s3244 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 14678963-14679462 Capsella rubella
Carub.0007s3244 0.5kb downstream 0.5kb downstream 4347 true scaffold_7: 14674616-14678962 Capsella rubella
Carub.0007s3244 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 14674616-14675115 Capsella rubella
Carub.0007s3244 1.0kb upstream 1.0kb upstream 4847 true scaffold_7: 14675116-14679962 Capsella rubella
Carub.0007s3244 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 14678963-14679962 Capsella rubella
Carub.0007s3244 1.0kb downstream 1.0kb downstream 4847 true scaffold_7: 14674116-14678962 Capsella rubella
Carub.0007s3244 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 14674116-14675115 Capsella rubella
Carub.0007s3244 2.0kb upstream 2.0kb upstream 5847 true scaffold_7: 14675116-14680962 Capsella rubella
Carub.0007s3244 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 14678963-14680962 Capsella rubella
Carub.0007s3244 2.0kb downstream 2.0kb downstream 5847 true scaffold_7: 14673116-14678962 Capsella rubella
Carub.0007s3244 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 14673116-14675115 Capsella rubella
Carub.0007s3244 5.0kb upstream 5.0kb upstream 8847 true scaffold_7: 14675116-14683962 Capsella rubella
Carub.0007s3244 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 14678963-14683962 Capsella rubella
Carub.0007s3244 5.0kb downstream 5.0kb downstream 8847 true scaffold_7: 14670116-14678962 Capsella rubella
Carub.0007s3244 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 14670116-14675115 Capsella rubella
Carub.0007s3244 10.0kb upstream 10.0kb upstream 13847 true scaffold_7: 14675116-14688962 Capsella rubella
Carub.0007s3244 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 14678963-14688962 Capsella rubella
Carub.0007s3244 10.0kb downstream 10.0kb downstream 13847 true scaffold_7: 14665116-14678962 Capsella rubella
Carub.0007s3244 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 14665116-14675115 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376695 5261 Brassicaceae View MSA
123835811 5264 Brassicales-Malvales View MSA
124322091 5266 SBM View MSA
124253929 5268 Malvidae View MSA
124069153 5270 Rosid View MSA
123738097 5271 Pentapetalae View MSA
122788164 5272 Eudicot View MSA
122049966 5273 Angiosperm View MSA
121347784 5274 Embryophyte View MSA
123425763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain