Gene : Carub.0006s1202 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.166 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase / Um2552 methyltransferase Genomic Order:  1202
Name:  ? Carub.0006s1202 Secondary Identifier:  ? PAC:39246851
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1202 0.5kb upstream 0.5kb upstream 2062 true scaffold_6: 4481759-4483820 Capsella rubella
Carub.0006s1202 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4481759-4482258 Capsella rubella
Carub.0006s1202 0.5kb downstream 0.5kb downstream 2062 true scaffold_6: 4482259-4484320 Capsella rubella
Carub.0006s1202 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4483821-4484320 Capsella rubella
Carub.0006s1202 1.0kb upstream 1.0kb upstream 2562 true scaffold_6: 4481259-4483820 Capsella rubella
Carub.0006s1202 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4481259-4482258 Capsella rubella
Carub.0006s1202 1.0kb downstream 1.0kb downstream 2562 true scaffold_6: 4482259-4484820 Capsella rubella
Carub.0006s1202 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4483821-4484820 Capsella rubella
Carub.0006s1202 2.0kb upstream 2.0kb upstream 3562 true scaffold_6: 4480259-4483820 Capsella rubella
Carub.0006s1202 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4480259-4482258 Capsella rubella
Carub.0006s1202 2.0kb downstream 2.0kb downstream 3562 true scaffold_6: 4482259-4485820 Capsella rubella
Carub.0006s1202 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4483821-4485820 Capsella rubella
Carub.0006s1202 5.0kb upstream 5.0kb upstream 6562 true scaffold_6: 4477259-4483820 Capsella rubella
Carub.0006s1202 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4477259-4482258 Capsella rubella
Carub.0006s1202 5.0kb downstream 5.0kb downstream 6562 true scaffold_6: 4482259-4488820 Capsella rubella
Carub.0006s1202 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4483821-4488820 Capsella rubella
Carub.0006s1202 10.0kb upstream 10.0kb upstream 11562 true scaffold_6: 4472259-4483820 Capsella rubella
Carub.0006s1202 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4472259-4482258 Capsella rubella
Carub.0006s1202 10.0kb downstream 10.0kb downstream 11562 true scaffold_6: 4482259-4493820 Capsella rubella
Carub.0006s1202 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4483821-4493820 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362672 5261 Brassicaceae View MSA
123834267 5264 Brassicales-Malvales View MSA
124344708 5266 SBM View MSA
124238776 5268 Malvidae View MSA
124063503 5270 Rosid View MSA
123742065 5271 Pentapetalae View MSA
122791552 5272 Eudicot View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain