Gene : Carub.0007s3356 C. rubella v1.1
Genomic Order:  3356 Name:  ? Carub.0007s3356
Secondary Identifier:  ? PAC:39232309
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3356 0.5kb upstream 0.5kb upstream 1667 true scaffold_7: 15308155-15309821 Capsella rubella
Carub.0007s3356 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 15309322-15309821 Capsella rubella
Carub.0007s3356 0.5kb downstream 0.5kb downstream 1667 true scaffold_7: 15307655-15309321 Capsella rubella
Carub.0007s3356 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 15307655-15308154 Capsella rubella
Carub.0007s3356 1.0kb upstream 1.0kb upstream 2167 true scaffold_7: 15308155-15310321 Capsella rubella
Carub.0007s3356 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 15309322-15310321 Capsella rubella
Carub.0007s3356 1.0kb downstream 1.0kb downstream 2167 true scaffold_7: 15307155-15309321 Capsella rubella
Carub.0007s3356 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 15307155-15308154 Capsella rubella
Carub.0007s3356 2.0kb upstream 2.0kb upstream 3167 true scaffold_7: 15308155-15311321 Capsella rubella
Carub.0007s3356 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 15309322-15311321 Capsella rubella
Carub.0007s3356 2.0kb downstream 2.0kb downstream 3167 true scaffold_7: 15306155-15309321 Capsella rubella
Carub.0007s3356 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 15306155-15308154 Capsella rubella
Carub.0007s3356 5.0kb upstream 5.0kb upstream 6167 true scaffold_7: 15308155-15314321 Capsella rubella
Carub.0007s3356 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 15309322-15314321 Capsella rubella
Carub.0007s3356 5.0kb downstream 5.0kb downstream 6167 true scaffold_7: 15303155-15309321 Capsella rubella
Carub.0007s3356 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 15303155-15308154 Capsella rubella
Carub.0007s3356 10.0kb upstream 10.0kb upstream 11167 true scaffold_7: 15308155-15319321 Capsella rubella
Carub.0007s3356 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 15309322-15319321 Capsella rubella
Carub.0007s3356 10.0kb downstream 10.0kb downstream 11167 true scaffold_7: 15298155-15309321 Capsella rubella
Carub.0007s3356 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 15298155-15308154 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335368 5261 Brassicaceae Singleton cluster - no MSA
123841545 5264 Brassicales-Malvales View MSA
124348294 5266 SBM View MSA
124244856 5268 Malvidae View MSA
124070501 5270 Rosid View MSA
123747526 5271 Pentapetalae View MSA
122794288 5272 Eudicot View MSA
122042507 5273 Angiosperm View MSA
121309981 5274 Embryophyte View MSA
123347593 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain