Gene : Carub.0007s3151 C. rubella v1.1

Defline:  (1 of 1) PTHR24423//PTHR24423:SF363 - TWO-COMPONENT SENSOR HISTIDINE KINASE // HISTIDINE KINASE 2 Genomic Order:  3151
Name:  ? Carub.0007s3151 Secondary Identifier:  ? PAC:39233080

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3151 0.5kb upstream 0.5kb upstream 6020 true scaffold_7: 13971423-13977442 Capsella rubella
Carub.0007s3151 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 13976943-13977442 Capsella rubella
Carub.0007s3151 0.5kb downstream 0.5kb downstream 6020 true scaffold_7: 13970923-13976942 Capsella rubella
Carub.0007s3151 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13970923-13971422 Capsella rubella
Carub.0007s3151 1.0kb upstream 1.0kb upstream 6520 true scaffold_7: 13971423-13977942 Capsella rubella
Carub.0007s3151 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 13976943-13977942 Capsella rubella
Carub.0007s3151 1.0kb downstream 1.0kb downstream 6520 true scaffold_7: 13970423-13976942 Capsella rubella
Carub.0007s3151 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13970423-13971422 Capsella rubella
Carub.0007s3151 2.0kb upstream 2.0kb upstream 7520 true scaffold_7: 13971423-13978942 Capsella rubella
Carub.0007s3151 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 13976943-13978942 Capsella rubella
Carub.0007s3151 2.0kb downstream 2.0kb downstream 7520 true scaffold_7: 13969423-13976942 Capsella rubella
Carub.0007s3151 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13969423-13971422 Capsella rubella
Carub.0007s3151 5.0kb upstream 5.0kb upstream 10520 true scaffold_7: 13971423-13981942 Capsella rubella
Carub.0007s3151 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 13976943-13981942 Capsella rubella
Carub.0007s3151 5.0kb downstream 5.0kb downstream 10520 true scaffold_7: 13966423-13976942 Capsella rubella
Carub.0007s3151 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13966423-13971422 Capsella rubella
Carub.0007s3151 10.0kb upstream 10.0kb upstream 15520 true scaffold_7: 13971423-13986942 Capsella rubella
Carub.0007s3151 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 13976943-13986942 Capsella rubella
Carub.0007s3151 10.0kb downstream 10.0kb downstream 15520 true scaffold_7: 13961423-13976942 Capsella rubella
Carub.0007s3151 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13961423-13971422 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368427 5261 Brassicaceae View MSA
123829102 5264 Brassicales-Malvales View MSA
124344022 5266 SBM View MSA
124241608 5268 Malvidae View MSA
124068917 5270 Rosid View MSA
123748356 5271 Pentapetalae View MSA
122791425 5272 Eudicot View MSA
122045050 5273 Angiosperm View MSA
123429048 5275 Viridiplantae View MSA
121351756 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain