Gene : Carub.0007s3210 C. rubella v1.1
Defline:  (1 of 1) K01895 - acetyl-CoA synthetase (ACSS, acs) Genomic Order:  3210
Name:  ? Carub.0007s3210 Secondary Identifier:  ? PAC:39232144
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY66-21 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3210 0.5kb upstream 0.5kb upstream 5842 true scaffold_7: 14471959-14477800 Capsella rubella
Carub.0007s3210 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 14477301-14477800 Capsella rubella
Carub.0007s3210 0.5kb downstream 0.5kb downstream 5842 true scaffold_7: 14471459-14477300 Capsella rubella
Carub.0007s3210 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 14471459-14471958 Capsella rubella
Carub.0007s3210 1.0kb upstream 1.0kb upstream 6342 true scaffold_7: 14471959-14478300 Capsella rubella
Carub.0007s3210 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 14477301-14478300 Capsella rubella
Carub.0007s3210 1.0kb downstream 1.0kb downstream 6342 true scaffold_7: 14470959-14477300 Capsella rubella
Carub.0007s3210 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 14470959-14471958 Capsella rubella
Carub.0007s3210 2.0kb upstream 2.0kb upstream 7342 true scaffold_7: 14471959-14479300 Capsella rubella
Carub.0007s3210 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 14477301-14479300 Capsella rubella
Carub.0007s3210 2.0kb downstream 2.0kb downstream 7342 true scaffold_7: 14469959-14477300 Capsella rubella
Carub.0007s3210 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 14469959-14471958 Capsella rubella
Carub.0007s3210 5.0kb upstream 5.0kb upstream 10342 true scaffold_7: 14471959-14482300 Capsella rubella
Carub.0007s3210 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 14477301-14482300 Capsella rubella
Carub.0007s3210 5.0kb downstream 5.0kb downstream 10342 true scaffold_7: 14466959-14477300 Capsella rubella
Carub.0007s3210 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 14466959-14471958 Capsella rubella
Carub.0007s3210 10.0kb upstream 10.0kb upstream 15342 true scaffold_7: 14471959-14487300 Capsella rubella
Carub.0007s3210 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 14477301-14487300 Capsella rubella
Carub.0007s3210 10.0kb downstream 10.0kb downstream 15342 true scaffold_7: 14461959-14477300 Capsella rubella
Carub.0007s3210 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 14461959-14471958 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375220 5261 Brassicaceae View MSA
123831585 5264 Brassicales-Malvales View MSA
124346209 5266 SBM View MSA
124241658 5268 Malvidae View MSA
124065659 5270 Rosid View MSA
123746880 5271 Pentapetalae View MSA
122789146 5272 Eudicot View MSA
122041906 5273 Angiosperm View MSA
121351540 5274 Embryophyte View MSA
123424340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain