Gene : Carub.0002s1420 C. rubella v1.1

Defline:  (1 of 3) PTHR24012:SF415 - F12A21.10-RELATED Genomic Order:  1420
Name:  ? Carub.0002s1420 Secondary Identifier:  ? PAC:39244249

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1420 0.5kb upstream 0.5kb upstream 2778 true scaffold_2: 8759649-8762426 Capsella rubella
Carub.0002s1420 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8759649-8760148 Capsella rubella
Carub.0002s1420 0.5kb downstream 0.5kb downstream 2778 true scaffold_2: 8760149-8762926 Capsella rubella
Carub.0002s1420 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8762427-8762926 Capsella rubella
Carub.0002s1420 1.0kb upstream 1.0kb upstream 3278 true scaffold_2: 8759149-8762426 Capsella rubella
Carub.0002s1420 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8759149-8760148 Capsella rubella
Carub.0002s1420 1.0kb downstream 1.0kb downstream 3278 true scaffold_2: 8760149-8763426 Capsella rubella
Carub.0002s1420 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8762427-8763426 Capsella rubella
Carub.0002s1420 2.0kb upstream 2.0kb upstream 4278 true scaffold_2: 8758149-8762426 Capsella rubella
Carub.0002s1420 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8758149-8760148 Capsella rubella
Carub.0002s1420 2.0kb downstream 2.0kb downstream 4278 true scaffold_2: 8760149-8764426 Capsella rubella
Carub.0002s1420 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8762427-8764426 Capsella rubella
Carub.0002s1420 5.0kb upstream 5.0kb upstream 7278 true scaffold_2: 8755149-8762426 Capsella rubella
Carub.0002s1420 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8755149-8760148 Capsella rubella
Carub.0002s1420 5.0kb downstream 5.0kb downstream 7278 true scaffold_2: 8760149-8767426 Capsella rubella
Carub.0002s1420 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8762427-8767426 Capsella rubella
Carub.0002s1420 10.0kb upstream 10.0kb upstream 12278 true scaffold_2: 8750149-8762426 Capsella rubella
Carub.0002s1420 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8750149-8760148 Capsella rubella
Carub.0002s1420 10.0kb downstream 10.0kb downstream 12278 true scaffold_2: 8760149-8772426 Capsella rubella
Carub.0002s1420 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8762427-8772426 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371013 5261 Brassicaceae View MSA
123840445 5264 Brassicales-Malvales View MSA
124338331 5266 SBM View MSA
124239893 5268 Malvidae View MSA
124070321 5270 Rosid View MSA
123745062 5271 Pentapetalae View MSA
122789647 5272 Eudicot View MSA
122044254 5273 Angiosperm View MSA
121348969 5274 Embryophyte View MSA
123381105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain