Gene : Carub.0002s1772 C. rubella v1.1
Defline:  (1 of 8) K13947 - auxin efflux carrier family (PIN) Genomic Order:  1772
Name:  ? Carub.0002s1772 Secondary Identifier:  ? PAC:39245790
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1772 0.5kb upstream 0.5kb upstream 3951 true scaffold_2: 10244407-10248357 Capsella rubella
Carub.0002s1772 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10244407-10244906 Capsella rubella
Carub.0002s1772 0.5kb downstream 0.5kb downstream 3951 true scaffold_2: 10244907-10248857 Capsella rubella
Carub.0002s1772 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10248358-10248857 Capsella rubella
Carub.0002s1772 1.0kb upstream 1.0kb upstream 4451 true scaffold_2: 10243907-10248357 Capsella rubella
Carub.0002s1772 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10243907-10244906 Capsella rubella
Carub.0002s1772 1.0kb downstream 1.0kb downstream 4451 true scaffold_2: 10244907-10249357 Capsella rubella
Carub.0002s1772 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10248358-10249357 Capsella rubella
Carub.0002s1772 2.0kb upstream 2.0kb upstream 5451 true scaffold_2: 10242907-10248357 Capsella rubella
Carub.0002s1772 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10242907-10244906 Capsella rubella
Carub.0002s1772 2.0kb downstream 2.0kb downstream 5451 true scaffold_2: 10244907-10250357 Capsella rubella
Carub.0002s1772 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10248358-10250357 Capsella rubella
Carub.0002s1772 5.0kb upstream 5.0kb upstream 8451 true scaffold_2: 10239907-10248357 Capsella rubella
Carub.0002s1772 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10239907-10244906 Capsella rubella
Carub.0002s1772 5.0kb downstream 5.0kb downstream 8451 true scaffold_2: 10244907-10253357 Capsella rubella
Carub.0002s1772 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10248358-10253357 Capsella rubella
Carub.0002s1772 10.0kb upstream 10.0kb upstream 13451 true scaffold_2: 10234907-10248357 Capsella rubella
Carub.0002s1772 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10234907-10244906 Capsella rubella
Carub.0002s1772 10.0kb downstream 10.0kb downstream 13451 true scaffold_2: 10244907-10258357 Capsella rubella
Carub.0002s1772 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10248358-10258357 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369164 5261 Brassicaceae View MSA
123839868 5264 Brassicales-Malvales View MSA
124349829 5266 SBM View MSA
124250518 5268 Malvidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain