Gene : Carub.0002s1359 C. rubella v1.1
Defline:  (1 of 1) PTHR23335//PTHR23335:SF1 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA // CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 Genomic Order:  1359
Name:  ? Carub.0002s1359 Secondary Identifier:  ? PAC:39245206
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1359 0.5kb upstream 0.5kb upstream 5931 true scaffold_2: 8486868-8492798 Capsella rubella
Carub.0002s1359 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8492299-8492798 Capsella rubella
Carub.0002s1359 0.5kb downstream 0.5kb downstream 5931 true scaffold_2: 8486368-8492298 Capsella rubella
Carub.0002s1359 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8486368-8486867 Capsella rubella
Carub.0002s1359 1.0kb upstream 1.0kb upstream 6431 true scaffold_2: 8486868-8493298 Capsella rubella
Carub.0002s1359 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8492299-8493298 Capsella rubella
Carub.0002s1359 1.0kb downstream 1.0kb downstream 6431 true scaffold_2: 8485868-8492298 Capsella rubella
Carub.0002s1359 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8485868-8486867 Capsella rubella
Carub.0002s1359 2.0kb upstream 2.0kb upstream 7431 true scaffold_2: 8486868-8494298 Capsella rubella
Carub.0002s1359 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8492299-8494298 Capsella rubella
Carub.0002s1359 2.0kb downstream 2.0kb downstream 7431 true scaffold_2: 8484868-8492298 Capsella rubella
Carub.0002s1359 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8484868-8486867 Capsella rubella
Carub.0002s1359 5.0kb upstream 5.0kb upstream 10431 true scaffold_2: 8486868-8497298 Capsella rubella
Carub.0002s1359 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8492299-8497298 Capsella rubella
Carub.0002s1359 5.0kb downstream 5.0kb downstream 10431 true scaffold_2: 8481868-8492298 Capsella rubella
Carub.0002s1359 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8481868-8486867 Capsella rubella
Carub.0002s1359 10.0kb upstream 10.0kb upstream 15431 true scaffold_2: 8486868-8502298 Capsella rubella
Carub.0002s1359 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8492299-8502298 Capsella rubella
Carub.0002s1359 10.0kb downstream 10.0kb downstream 15431 true scaffold_2: 8476868-8492298 Capsella rubella
Carub.0002s1359 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8476868-8486867 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368365 5261 Brassicaceae View MSA
123829520 5264 Brassicales-Malvales View MSA
124340644 5266 SBM View MSA
124238689 5268 Malvidae View MSA
124064379 5270 Rosid View MSA
123737526 5271 Pentapetalae View MSA
122795651 5272 Eudicot View MSA
122049941 5273 Angiosperm View MSA
121311657 5274 Embryophyte View MSA
123348927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain