Gene : Carub.0002s1607 C. rubella v1.1
Defline:  (1 of 5) PTHR22811//PTHR22811:SF47 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // EMP24/GP25L/P24 FAMILY/GOLD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1607
Name:  ? Carub.0002s1607 Secondary Identifier:  ? PAC:39245450
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1607 0.5kb upstream 0.5kb upstream 1716 true scaffold_2: 9526915-9528630 Capsella rubella
Carub.0002s1607 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9528131-9528630 Capsella rubella
Carub.0002s1607 0.5kb downstream 0.5kb downstream 1716 true scaffold_2: 9526415-9528130 Capsella rubella
Carub.0002s1607 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9526415-9526914 Capsella rubella
Carub.0002s1607 1.0kb upstream 1.0kb upstream 2216 true scaffold_2: 9526915-9529130 Capsella rubella
Carub.0002s1607 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9528131-9529130 Capsella rubella
Carub.0002s1607 1.0kb downstream 1.0kb downstream 2216 true scaffold_2: 9525915-9528130 Capsella rubella
Carub.0002s1607 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9525915-9526914 Capsella rubella
Carub.0002s1607 2.0kb upstream 2.0kb upstream 3216 true scaffold_2: 9526915-9530130 Capsella rubella
Carub.0002s1607 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9528131-9530130 Capsella rubella
Carub.0002s1607 2.0kb downstream 2.0kb downstream 3216 true scaffold_2: 9524915-9528130 Capsella rubella
Carub.0002s1607 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9524915-9526914 Capsella rubella
Carub.0002s1607 5.0kb upstream 5.0kb upstream 6216 true scaffold_2: 9526915-9533130 Capsella rubella
Carub.0002s1607 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9528131-9533130 Capsella rubella
Carub.0002s1607 5.0kb downstream 5.0kb downstream 6216 true scaffold_2: 9521915-9528130 Capsella rubella
Carub.0002s1607 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9521915-9526914 Capsella rubella
Carub.0002s1607 10.0kb upstream 10.0kb upstream 11216 true scaffold_2: 9526915-9538130 Capsella rubella
Carub.0002s1607 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9528131-9538130 Capsella rubella
Carub.0002s1607 10.0kb downstream 10.0kb downstream 11216 true scaffold_2: 9516915-9528130 Capsella rubella
Carub.0002s1607 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9516915-9526914 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362568 5261 Brassicaceae View MSA
123798385 5264 Brassicales-Malvales View MSA
124296026 5266 SBM View MSA
124253554 5268 Malvidae View MSA
124070301 5270 Rosid View MSA
123742196 5271 Pentapetalae View MSA
122791106 5272 Eudicot View MSA
122049810 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain