Gene : Carub.0002s1652 C. rubella v1.1
Defline:  (1 of 1) PTHR10357:SF171 - ALPHA-AMYLASE 3, CHLOROPLASTIC Genomic Order:  1652
Name:  ? Carub.0002s1652 Secondary Identifier:  ? PAC:39244285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1652 0.5kb upstream 0.5kb upstream 5173 true scaffold_2: 9738318-9743490 Capsella rubella
Carub.0002s1652 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9742991-9743490 Capsella rubella
Carub.0002s1652 0.5kb downstream 0.5kb downstream 5173 true scaffold_2: 9737818-9742990 Capsella rubella
Carub.0002s1652 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9737818-9738317 Capsella rubella
Carub.0002s1652 1.0kb upstream 1.0kb upstream 5673 true scaffold_2: 9738318-9743990 Capsella rubella
Carub.0002s1652 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9742991-9743990 Capsella rubella
Carub.0002s1652 1.0kb downstream 1.0kb downstream 5673 true scaffold_2: 9737318-9742990 Capsella rubella
Carub.0002s1652 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9737318-9738317 Capsella rubella
Carub.0002s1652 2.0kb upstream 2.0kb upstream 6673 true scaffold_2: 9738318-9744990 Capsella rubella
Carub.0002s1652 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9742991-9744990 Capsella rubella
Carub.0002s1652 2.0kb downstream 2.0kb downstream 6673 true scaffold_2: 9736318-9742990 Capsella rubella
Carub.0002s1652 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9736318-9738317 Capsella rubella
Carub.0002s1652 5.0kb upstream 5.0kb upstream 9673 true scaffold_2: 9738318-9747990 Capsella rubella
Carub.0002s1652 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9742991-9747990 Capsella rubella
Carub.0002s1652 5.0kb downstream 5.0kb downstream 9673 true scaffold_2: 9733318-9742990 Capsella rubella
Carub.0002s1652 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9733318-9738317 Capsella rubella
Carub.0002s1652 10.0kb upstream 10.0kb upstream 14673 true scaffold_2: 9738318-9752990 Capsella rubella
Carub.0002s1652 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9742991-9752990 Capsella rubella
Carub.0002s1652 10.0kb downstream 10.0kb downstream 14673 true scaffold_2: 9728318-9742990 Capsella rubella
Carub.0002s1652 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9728318-9738317 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041096 5273 Angiosperm View MSA
122364998 5261 Brassicaceae View MSA
123830540 5264 Brassicales-Malvales View MSA
124338703 5266 SBM View MSA
124243652 5268 Malvidae View MSA
124067208 5270 Rosid View MSA
123738092 5271 Pentapetalae View MSA
122789264 5272 Eudicot View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain