Gene : Carub.0002s1646 C. rubella v1.1
Defline:  (1 of 2) PTHR24326:SF176 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13-RELATED Genomic Order:  1646
Name:  ? Carub.0002s1646 Secondary Identifier:  ? PAC:39243279
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1646 0.5kb upstream 0.5kb upstream 2358 true scaffold_2: 9707866-9710223 Capsella rubella
Carub.0002s1646 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9707866-9708365 Capsella rubella
Carub.0002s1646 0.5kb downstream 0.5kb downstream 2358 true scaffold_2: 9708366-9710723 Capsella rubella
Carub.0002s1646 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9710224-9710723 Capsella rubella
Carub.0002s1646 1.0kb upstream 1.0kb upstream 2858 true scaffold_2: 9707366-9710223 Capsella rubella
Carub.0002s1646 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9707366-9708365 Capsella rubella
Carub.0002s1646 1.0kb downstream 1.0kb downstream 2858 true scaffold_2: 9708366-9711223 Capsella rubella
Carub.0002s1646 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9710224-9711223 Capsella rubella
Carub.0002s1646 2.0kb upstream 2.0kb upstream 3858 true scaffold_2: 9706366-9710223 Capsella rubella
Carub.0002s1646 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9706366-9708365 Capsella rubella
Carub.0002s1646 2.0kb downstream 2.0kb downstream 3858 true scaffold_2: 9708366-9712223 Capsella rubella
Carub.0002s1646 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9710224-9712223 Capsella rubella
Carub.0002s1646 5.0kb upstream 5.0kb upstream 6858 true scaffold_2: 9703366-9710223 Capsella rubella
Carub.0002s1646 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9703366-9708365 Capsella rubella
Carub.0002s1646 5.0kb downstream 5.0kb downstream 6858 true scaffold_2: 9708366-9715223 Capsella rubella
Carub.0002s1646 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9710224-9715223 Capsella rubella
Carub.0002s1646 10.0kb upstream 10.0kb upstream 11858 true scaffold_2: 9698366-9710223 Capsella rubella
Carub.0002s1646 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9698366-9708365 Capsella rubella
Carub.0002s1646 10.0kb downstream 10.0kb downstream 11858 true scaffold_2: 9708366-9720223 Capsella rubella
Carub.0002s1646 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9710224-9720223 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367597 5261 Brassicaceae View MSA
123840081 5264 Brassicales-Malvales View MSA
124345993 5266 SBM View MSA
124238440 5268 Malvidae View MSA
124061790 5270 Rosid View MSA
123747120 5271 Pentapetalae View MSA
122786437 5272 Eudicot View MSA
122042617 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain