Gene : Carub.0002s1438 C. rubella v1.1
Defline:  (1 of 4) PTHR23257:SF485 - PAS DOMAIN-CONTAINING PROTEIN TYROSINE KINASE Genomic Order:  1438
Name:  ? Carub.0002s1438 Secondary Identifier:  ? PAC:39245348
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1438 0.5kb upstream 0.5kb upstream 6330 true scaffold_2: 8822340-8828669 Capsella rubella
Carub.0002s1438 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8822340-8822839 Capsella rubella
Carub.0002s1438 0.5kb downstream 0.5kb downstream 6330 true scaffold_2: 8822840-8829169 Capsella rubella
Carub.0002s1438 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8828670-8829169 Capsella rubella
Carub.0002s1438 1.0kb upstream 1.0kb upstream 6830 true scaffold_2: 8821840-8828669 Capsella rubella
Carub.0002s1438 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8821840-8822839 Capsella rubella
Carub.0002s1438 1.0kb downstream 1.0kb downstream 6830 true scaffold_2: 8822840-8829669 Capsella rubella
Carub.0002s1438 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8828670-8829669 Capsella rubella
Carub.0002s1438 2.0kb upstream 2.0kb upstream 7830 true scaffold_2: 8820840-8828669 Capsella rubella
Carub.0002s1438 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8820840-8822839 Capsella rubella
Carub.0002s1438 2.0kb downstream 2.0kb downstream 7830 true scaffold_2: 8822840-8830669 Capsella rubella
Carub.0002s1438 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8828670-8830669 Capsella rubella
Carub.0002s1438 5.0kb upstream 5.0kb upstream 10830 true scaffold_2: 8817840-8828669 Capsella rubella
Carub.0002s1438 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8817840-8822839 Capsella rubella
Carub.0002s1438 5.0kb downstream 5.0kb downstream 10830 true scaffold_2: 8822840-8833669 Capsella rubella
Carub.0002s1438 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8828670-8833669 Capsella rubella
Carub.0002s1438 10.0kb upstream 10.0kb upstream 15830 true scaffold_2: 8812840-8828669 Capsella rubella
Carub.0002s1438 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8812840-8822839 Capsella rubella
Carub.0002s1438 10.0kb downstream 10.0kb downstream 15830 true scaffold_2: 8822840-8838669 Capsella rubella
Carub.0002s1438 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8828670-8838669 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338532 5261 Brassicaceae View MSA
123779098 5264 Brassicales-Malvales View MSA
124277431 5266 SBM View MSA
124132634 5268 Malvidae View MSA
123860912 5270 Rosid View MSA
123745190 5271 Pentapetalae View MSA
122793223 5272 Eudicot View MSA
122045433 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310448 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain