Gene : Carub.0002s1460 C. rubella v1.1
Defline:  (1 of 3) PTHR31421:SF0 - PROTEIN BASIC PENTACYSTEINE1-RELATED Genomic Order:  1460
Name:  ? Carub.0002s1460 Secondary Identifier:  ? PAC:39245423
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1460 0.5kb upstream 0.5kb upstream 1361 true scaffold_2: 8900644-8902004 Capsella rubella
Carub.0002s1460 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8901505-8902004 Capsella rubella
Carub.0002s1460 0.5kb downstream 0.5kb downstream 1361 true scaffold_2: 8900144-8901504 Capsella rubella
Carub.0002s1460 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8900144-8900643 Capsella rubella
Carub.0002s1460 1.0kb upstream 1.0kb upstream 1861 true scaffold_2: 8900644-8902504 Capsella rubella
Carub.0002s1460 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8901505-8902504 Capsella rubella
Carub.0002s1460 1.0kb downstream 1.0kb downstream 1861 true scaffold_2: 8899644-8901504 Capsella rubella
Carub.0002s1460 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8899644-8900643 Capsella rubella
Carub.0002s1460 2.0kb upstream 2.0kb upstream 2861 true scaffold_2: 8900644-8903504 Capsella rubella
Carub.0002s1460 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8901505-8903504 Capsella rubella
Carub.0002s1460 2.0kb downstream 2.0kb downstream 2861 true scaffold_2: 8898644-8901504 Capsella rubella
Carub.0002s1460 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8898644-8900643 Capsella rubella
Carub.0002s1460 5.0kb upstream 5.0kb upstream 5861 true scaffold_2: 8900644-8906504 Capsella rubella
Carub.0002s1460 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8901505-8906504 Capsella rubella
Carub.0002s1460 5.0kb downstream 5.0kb downstream 5861 true scaffold_2: 8895644-8901504 Capsella rubella
Carub.0002s1460 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8895644-8900643 Capsella rubella
Carub.0002s1460 10.0kb upstream 10.0kb upstream 10861 true scaffold_2: 8900644-8911504 Capsella rubella
Carub.0002s1460 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8901505-8911504 Capsella rubella
Carub.0002s1460 10.0kb downstream 10.0kb downstream 10861 true scaffold_2: 8890644-8901504 Capsella rubella
Carub.0002s1460 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8890644-8900643 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365798 5261 Brassicaceae View MSA
123799038 5264 Brassicales-Malvales View MSA
124296600 5266 SBM View MSA
124148704 5268 Malvidae View MSA
123874648 5270 Rosid View MSA
123458588 5271 Pentapetalae View MSA
122493992 5272 Eudicot View MSA
122049801 5273 Angiosperm View MSA
121311594 5274 Embryophyte View MSA
123348870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain