Gene : Carub.0002s1511 C. rubella v1.1
Defline:  (1 of 1) PTHR31917//PTHR31917:SF9 - FAMILY NOT NAMED // AGENET DOMAIN-CONTAINING PROTEIN / BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN Genomic Order:  1511
Name:  ? Carub.0002s1511 Secondary Identifier:  ? PAC:39244406
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1511 0.5kb upstream 0.5kb upstream 3811 true scaffold_2: 9132196-9136006 Capsella rubella
Carub.0002s1511 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9132196-9132695 Capsella rubella
Carub.0002s1511 0.5kb downstream 0.5kb downstream 3811 true scaffold_2: 9132696-9136506 Capsella rubella
Carub.0002s1511 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9136007-9136506 Capsella rubella
Carub.0002s1511 1.0kb upstream 1.0kb upstream 4311 true scaffold_2: 9131696-9136006 Capsella rubella
Carub.0002s1511 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9131696-9132695 Capsella rubella
Carub.0002s1511 1.0kb downstream 1.0kb downstream 4311 true scaffold_2: 9132696-9137006 Capsella rubella
Carub.0002s1511 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9136007-9137006 Capsella rubella
Carub.0002s1511 2.0kb upstream 2.0kb upstream 5311 true scaffold_2: 9130696-9136006 Capsella rubella
Carub.0002s1511 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9130696-9132695 Capsella rubella
Carub.0002s1511 2.0kb downstream 2.0kb downstream 5311 true scaffold_2: 9132696-9138006 Capsella rubella
Carub.0002s1511 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9136007-9138006 Capsella rubella
Carub.0002s1511 5.0kb upstream 5.0kb upstream 8311 true scaffold_2: 9127696-9136006 Capsella rubella
Carub.0002s1511 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9127696-9132695 Capsella rubella
Carub.0002s1511 5.0kb downstream 5.0kb downstream 8311 true scaffold_2: 9132696-9141006 Capsella rubella
Carub.0002s1511 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9136007-9141006 Capsella rubella
Carub.0002s1511 10.0kb upstream 10.0kb upstream 13311 true scaffold_2: 9122696-9136006 Capsella rubella
Carub.0002s1511 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9122696-9132695 Capsella rubella
Carub.0002s1511 10.0kb downstream 10.0kb downstream 13311 true scaffold_2: 9132696-9146006 Capsella rubella
Carub.0002s1511 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9136007-9146006 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373475 5261 Brassicaceae View MSA
123840978 5264 Brassicales-Malvales View MSA
124341895 5266 SBM View MSA
124238237 5268 Malvidae View MSA
124073290 5270 Rosid View MSA
123738159 5271 Pentapetalae View MSA
122792230 5272 Eudicot View MSA
122049413 5273 Angiosperm View MSA
121349027 5274 Embryophyte View MSA
123381130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain