Gene : Carub.0002s1562 C. rubella v1.1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Genomic Order:  1562
Name:  ? Carub.0002s1562 Secondary Identifier:  ? PAC:39244242
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1562 0.5kb upstream 0.5kb upstream 2489 true scaffold_2: 9343483-9345971 Capsella rubella
Carub.0002s1562 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9343483-9343982 Capsella rubella
Carub.0002s1562 0.5kb downstream 0.5kb downstream 2489 true scaffold_2: 9343983-9346471 Capsella rubella
Carub.0002s1562 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9345972-9346471 Capsella rubella
Carub.0002s1562 1.0kb upstream 1.0kb upstream 2989 true scaffold_2: 9342983-9345971 Capsella rubella
Carub.0002s1562 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9342983-9343982 Capsella rubella
Carub.0002s1562 1.0kb downstream 1.0kb downstream 2989 true scaffold_2: 9343983-9346971 Capsella rubella
Carub.0002s1562 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9345972-9346971 Capsella rubella
Carub.0002s1562 2.0kb upstream 2.0kb upstream 3989 true scaffold_2: 9341983-9345971 Capsella rubella
Carub.0002s1562 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9341983-9343982 Capsella rubella
Carub.0002s1562 2.0kb downstream 2.0kb downstream 3989 true scaffold_2: 9343983-9347971 Capsella rubella
Carub.0002s1562 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9345972-9347971 Capsella rubella
Carub.0002s1562 5.0kb upstream 5.0kb upstream 6989 true scaffold_2: 9338983-9345971 Capsella rubella
Carub.0002s1562 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9338983-9343982 Capsella rubella
Carub.0002s1562 5.0kb downstream 5.0kb downstream 6989 true scaffold_2: 9343983-9350971 Capsella rubella
Carub.0002s1562 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9345972-9350971 Capsella rubella
Carub.0002s1562 10.0kb upstream 10.0kb upstream 11989 true scaffold_2: 9333983-9345971 Capsella rubella
Carub.0002s1562 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9333983-9343982 Capsella rubella
Carub.0002s1562 10.0kb downstream 10.0kb downstream 11989 true scaffold_2: 9343983-9355971 Capsella rubella
Carub.0002s1562 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9345972-9355971 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370999 5261 Brassicaceae View MSA
123840262 5264 Brassicales-Malvales View MSA
124341799 5266 SBM View MSA
124253716 5268 Malvidae View MSA
124066475 5270 Rosid View MSA
123737331 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain