Gene : Carub.0002s1116 C. rubella v1.1
Defline:  (1 of 14) K11968 - ariadne-1 (ARIH1) Genomic Order:  1116
Name:  ? Carub.0002s1116 Secondary Identifier:  ? PAC:39244889
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1116 0.5kb upstream 0.5kb upstream 5635 true scaffold_2: 7150142-7155776 Capsella rubella
Carub.0002s1116 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7155277-7155776 Capsella rubella
Carub.0002s1116 0.5kb downstream 0.5kb downstream 5635 true scaffold_2: 7149642-7155276 Capsella rubella
Carub.0002s1116 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7149642-7150141 Capsella rubella
Carub.0002s1116 1.0kb upstream 1.0kb upstream 6135 true scaffold_2: 7150142-7156276 Capsella rubella
Carub.0002s1116 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7155277-7156276 Capsella rubella
Carub.0002s1116 1.0kb downstream 1.0kb downstream 6135 true scaffold_2: 7149142-7155276 Capsella rubella
Carub.0002s1116 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7149142-7150141 Capsella rubella
Carub.0002s1116 2.0kb upstream 2.0kb upstream 7135 true scaffold_2: 7150142-7157276 Capsella rubella
Carub.0002s1116 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7155277-7157276 Capsella rubella
Carub.0002s1116 2.0kb downstream 2.0kb downstream 7135 true scaffold_2: 7148142-7155276 Capsella rubella
Carub.0002s1116 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7148142-7150141 Capsella rubella
Carub.0002s1116 5.0kb upstream 5.0kb upstream 10135 true scaffold_2: 7150142-7160276 Capsella rubella
Carub.0002s1116 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7155277-7160276 Capsella rubella
Carub.0002s1116 5.0kb downstream 5.0kb downstream 10135 true scaffold_2: 7145142-7155276 Capsella rubella
Carub.0002s1116 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7145142-7150141 Capsella rubella
Carub.0002s1116 10.0kb upstream 10.0kb upstream 15135 true scaffold_2: 7150142-7165276 Capsella rubella
Carub.0002s1116 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7155277-7165276 Capsella rubella
Carub.0002s1116 10.0kb downstream 10.0kb downstream 15135 true scaffold_2: 7140142-7155276 Capsella rubella
Carub.0002s1116 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7140142-7150141 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365268 5261 Brassicaceae View MSA
123831076 5264 Brassicales-Malvales View MSA
124348050 5266 SBM View MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain