Protein : Carub.0002s1117.1.p C. rubella v1.1

Secondary Identifier:  PAC:39244066 Organism Name:  Capsella rubella
Length:  1656   Name:  Carub.0002s1117.1.p
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Proteins

13 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012337 Domain Ribonuclease H-like domain
IPR003029 Domain S1 domain
IPR027999 Domain Death-like domain of Spt6
IPR017072 Family Transcription elongation factor Spt6
IPR028231 Domain Transcription elongation factor Spt6, YqgF domain
IPR028088 Domain Helix-turn-helix DNA-binding domain of Spt6
IPR000980 Domain SH2 domain
IPR010994 Domain RuvA domain 2-like
IPR022967 Domain RNA-binding domain, S1
IPR028083 Domain Spt6 acidic, N-terminal domain
IPR023097 Domain Tex RuvX-like domain
IPR023323 Domain Tex-like domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0002s1117.1_CDS 4971   scaffold_2: 7156486-7164120 Capsella rubella

39 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0003676 GO Carub.0002s1117.1.p
GO:0003677 GO Carub.0002s1117.1.p
G3DSA:2.40.50.140 GENE3D Carub.0002s1117.1.p
G3DSA:3.30.505.10 GENE3D Carub.0002s1117.1.p
G3DSA:1.10.150.310 GENE3D Carub.0002s1117.1.p
G3DSA:1.10.3500.10 GENE3D Carub.0002s1117.1.p
2.7.7.6 ENZYME Carub.0002s1117.1.p
IPR012340 InterPro Carub.0002s1117.1.p
IPR017072 InterPro Carub.0002s1117.1.p
IPR010994 InterPro Carub.0002s1117.1.p
IPR012337 InterPro Carub.0002s1117.1.p
IPR000980 InterPro Carub.0002s1117.1.p
IPR003029 InterPro Carub.0002s1117.1.p
GO:0006357 GO Carub.0002s1117.1.p
GO:0032784 GO Carub.0002s1117.1.p
IPR028231 InterPro Carub.0002s1117.1.p
K11292 KEGG Carub.0002s1117.1.p
IPR028083 InterPro Carub.0002s1117.1.p
IPR028088 InterPro Carub.0002s1117.1.p
IPR023323 InterPro Carub.0002s1117.1.p
IPR027999 InterPro Carub.0002s1117.1.p
IPR022967 InterPro Carub.0002s1117.1.p
IPR023097 InterPro Carub.0002s1117.1.p
PF14641 PFAM Carub.0002s1117.1.p
PF14878 PFAM Carub.0002s1117.1.p
PF14635 PFAM Carub.0002s1117.1.p
PF14639 PFAM Carub.0002s1117.1.p
PF14632 PFAM Carub.0002s1117.1.p
PF14633 PFAM Carub.0002s1117.1.p
PTHR10145 PANTHER Carub.0002s1117.1.p

0 Pathway Components

0 Pathways