Gene : Carub.0006s1100 C. rubella v1.1
Defline:  (1 of 1) PTHR10811:SF16 - FRINGE-LIKE PROTEIN Genomic Order:  1100
Name:  ? Carub.0006s1100 Secondary Identifier:  ? PAC:39249415
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1100 0.5kb upstream 0.5kb upstream 2680 true scaffold_6: 4037268-4039947 Capsella rubella
Carub.0006s1100 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4037268-4037767 Capsella rubella
Carub.0006s1100 0.5kb downstream 0.5kb downstream 2680 true scaffold_6: 4037768-4040447 Capsella rubella
Carub.0006s1100 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4039948-4040447 Capsella rubella
Carub.0006s1100 1.0kb upstream 1.0kb upstream 3180 true scaffold_6: 4036768-4039947 Capsella rubella
Carub.0006s1100 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4036768-4037767 Capsella rubella
Carub.0006s1100 1.0kb downstream 1.0kb downstream 3180 true scaffold_6: 4037768-4040947 Capsella rubella
Carub.0006s1100 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4039948-4040947 Capsella rubella
Carub.0006s1100 2.0kb upstream 2.0kb upstream 4180 true scaffold_6: 4035768-4039947 Capsella rubella
Carub.0006s1100 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4035768-4037767 Capsella rubella
Carub.0006s1100 2.0kb downstream 2.0kb downstream 4180 true scaffold_6: 4037768-4041947 Capsella rubella
Carub.0006s1100 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4039948-4041947 Capsella rubella
Carub.0006s1100 5.0kb upstream 5.0kb upstream 7180 true scaffold_6: 4032768-4039947 Capsella rubella
Carub.0006s1100 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4032768-4037767 Capsella rubella
Carub.0006s1100 5.0kb downstream 5.0kb downstream 7180 true scaffold_6: 4037768-4044947 Capsella rubella
Carub.0006s1100 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4039948-4044947 Capsella rubella
Carub.0006s1100 10.0kb upstream 10.0kb upstream 12180 true scaffold_6: 4027768-4039947 Capsella rubella
Carub.0006s1100 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4027768-4037767 Capsella rubella
Carub.0006s1100 10.0kb downstream 10.0kb downstream 12180 true scaffold_6: 4037768-4049947 Capsella rubella
Carub.0006s1100 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4039948-4049947 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361744 5261 Brassicaceae View MSA
123838971 5264 Brassicales-Malvales View MSA
124349767 5266 SBM View MSA
124251096 5268 Malvidae View MSA
124070158 5270 Rosid View MSA
123749213 5271 Pentapetalae View MSA
122793908 5272 Eudicot View MSA
122048571 5273 Angiosperm View MSA
121350591 5274 Embryophyte View MSA
123381812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain