Gene : Carub.0002s0655 C. rubella v1.1
Defline:  (1 of 2) 2.4.2.17 - ATP phosphoribosyltransferase / Phosphoribosyl-ATP pyrophosphorylase Genomic Order:  655
Name:  ? Carub.0002s0655 Secondary Identifier:  ? PAC:39243780
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella HISTSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0655 0.5kb upstream 0.5kb upstream 3994 true scaffold_2: 2910905-2914898 Capsella rubella
Carub.0002s0655 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2910905-2911404 Capsella rubella
Carub.0002s0655 0.5kb downstream 0.5kb downstream 3994 true scaffold_2: 2911405-2915398 Capsella rubella
Carub.0002s0655 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2914899-2915398 Capsella rubella
Carub.0002s0655 1.0kb upstream 1.0kb upstream 4494 true scaffold_2: 2910405-2914898 Capsella rubella
Carub.0002s0655 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2910405-2911404 Capsella rubella
Carub.0002s0655 1.0kb downstream 1.0kb downstream 4494 true scaffold_2: 2911405-2915898 Capsella rubella
Carub.0002s0655 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2914899-2915898 Capsella rubella
Carub.0002s0655 2.0kb upstream 2.0kb upstream 5494 true scaffold_2: 2909405-2914898 Capsella rubella
Carub.0002s0655 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2909405-2911404 Capsella rubella
Carub.0002s0655 2.0kb downstream 2.0kb downstream 5494 true scaffold_2: 2911405-2916898 Capsella rubella
Carub.0002s0655 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2914899-2916898 Capsella rubella
Carub.0002s0655 5.0kb upstream 5.0kb upstream 8494 true scaffold_2: 2906405-2914898 Capsella rubella
Carub.0002s0655 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2906405-2911404 Capsella rubella
Carub.0002s0655 5.0kb downstream 5.0kb downstream 8494 true scaffold_2: 2911405-2919898 Capsella rubella
Carub.0002s0655 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2914899-2919898 Capsella rubella
Carub.0002s0655 10.0kb upstream 10.0kb upstream 13494 true scaffold_2: 2901405-2914898 Capsella rubella
Carub.0002s0655 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2901405-2911404 Capsella rubella
Carub.0002s0655 10.0kb downstream 10.0kb downstream 13494 true scaffold_2: 2911405-2924898 Capsella rubella
Carub.0002s0655 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2914899-2924898 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368034 5261 Brassicaceae View MSA
123840456 5264 Brassicales-Malvales View MSA
124322722 5266 SBM View MSA
124239271 5268 Malvidae View MSA
124065135 5270 Rosid View MSA
123747829 5271 Pentapetalae View MSA
122790103 5272 Eudicot View MSA
122042069 5273 Angiosperm View MSA
121345675 5274 Embryophyte View MSA
123427111 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain