Gene : Carub.0002s0665 C. rubella v1.1
Defline:  (1 of 27) K01188 - beta-glucosidase (E3.2.1.21) Genomic Order:  665
Name:  ? Carub.0002s0665 Secondary Identifier:  ? PAC:39243643
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5176 Capsella rubella pathologic  
Crubella PWY-7089 Capsella rubella pathologic  
Crubella PWY-7091 Capsella rubella pathologic  
Crubella PWY-7092 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0665 0.5kb upstream 0.5kb upstream 4808 true scaffold_2: 2969759-2974566 Capsella rubella
Carub.0002s0665 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2969759-2970258 Capsella rubella
Carub.0002s0665 0.5kb downstream 0.5kb downstream 4808 true scaffold_2: 2970259-2975066 Capsella rubella
Carub.0002s0665 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2974567-2975066 Capsella rubella
Carub.0002s0665 1.0kb upstream 1.0kb upstream 5308 true scaffold_2: 2969259-2974566 Capsella rubella
Carub.0002s0665 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2969259-2970258 Capsella rubella
Carub.0002s0665 1.0kb downstream 1.0kb downstream 5308 true scaffold_2: 2970259-2975566 Capsella rubella
Carub.0002s0665 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2974567-2975566 Capsella rubella
Carub.0002s0665 2.0kb upstream 2.0kb upstream 6308 true scaffold_2: 2968259-2974566 Capsella rubella
Carub.0002s0665 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2968259-2970258 Capsella rubella
Carub.0002s0665 2.0kb downstream 2.0kb downstream 6308 true scaffold_2: 2970259-2976566 Capsella rubella
Carub.0002s0665 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2974567-2976566 Capsella rubella
Carub.0002s0665 5.0kb upstream 5.0kb upstream 9308 true scaffold_2: 2965259-2974566 Capsella rubella
Carub.0002s0665 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2965259-2970258 Capsella rubella
Carub.0002s0665 5.0kb downstream 5.0kb downstream 9308 true scaffold_2: 2970259-2979566 Capsella rubella
Carub.0002s0665 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2974567-2979566 Capsella rubella
Carub.0002s0665 10.0kb upstream 10.0kb upstream 14308 true scaffold_2: 2960259-2974566 Capsella rubella
Carub.0002s0665 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2960259-2970258 Capsella rubella
Carub.0002s0665 10.0kb downstream 10.0kb downstream 14308 true scaffold_2: 2970259-2984566 Capsella rubella
Carub.0002s0665 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2974567-2984566 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691541 5273 Angiosperm View MSA
122336340 5261 Brassicaceae Singleton cluster - no MSA
123777061 5264 Brassicales-Malvales Singleton cluster - no MSA
124275437 5266 SBM Singleton cluster - no MSA
124252768 5268 Malvidae View MSA
124073758 5270 Rosid View MSA
123647504 5271 Pentapetalae View MSA
122681476 5272 Eudicot View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain