Gene : Carub.0002s1048 C. rubella v1.1
Genomic Order:  1048 Name:  ? Carub.0002s1048
Secondary Identifier:  ? PAC:39245817
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1048 0.5kb upstream 0.5kb upstream 2689 true scaffold_2: 6587660-6590348 Capsella rubella
Carub.0002s1048 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6587660-6588159 Capsella rubella
Carub.0002s1048 0.5kb downstream 0.5kb downstream 2689 true scaffold_2: 6588160-6590848 Capsella rubella
Carub.0002s1048 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6590349-6590848 Capsella rubella
Carub.0002s1048 1.0kb upstream 1.0kb upstream 3189 true scaffold_2: 6587160-6590348 Capsella rubella
Carub.0002s1048 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6587160-6588159 Capsella rubella
Carub.0002s1048 1.0kb downstream 1.0kb downstream 3189 true scaffold_2: 6588160-6591348 Capsella rubella
Carub.0002s1048 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6590349-6591348 Capsella rubella
Carub.0002s1048 2.0kb upstream 2.0kb upstream 4189 true scaffold_2: 6586160-6590348 Capsella rubella
Carub.0002s1048 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6586160-6588159 Capsella rubella
Carub.0002s1048 2.0kb downstream 2.0kb downstream 4189 true scaffold_2: 6588160-6592348 Capsella rubella
Carub.0002s1048 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6590349-6592348 Capsella rubella
Carub.0002s1048 5.0kb upstream 5.0kb upstream 7189 true scaffold_2: 6583160-6590348 Capsella rubella
Carub.0002s1048 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6583160-6588159 Capsella rubella
Carub.0002s1048 5.0kb downstream 5.0kb downstream 7189 true scaffold_2: 6588160-6595348 Capsella rubella
Carub.0002s1048 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6590349-6595348 Capsella rubella
Carub.0002s1048 10.0kb upstream 10.0kb upstream 12189 true scaffold_2: 6578160-6590348 Capsella rubella
Carub.0002s1048 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6578160-6588159 Capsella rubella
Carub.0002s1048 10.0kb downstream 10.0kb downstream 12189 true scaffold_2: 6588160-6600348 Capsella rubella
Carub.0002s1048 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6590349-6600348 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027888 5273 Angiosperm View MSA
122338541 5261 Brassicaceae View MSA
123779105 5264 Brassicales-Malvales View MSA
124277438 5266 SBM View MSA
124132640 5268 Malvidae View MSA
123860917 5270 Rosid View MSA
123446497 5271 Pentapetalae View MSA
122482048 5272 Eudicot View MSA
121297470 5274 Embryophyte View MSA
123335525 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain