Protein Family : retrotransposon protein, putative, unclassified, expressed 123335525

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  223

223 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
AT4G03830 (1 of 4) PF04642 - Protein of unknown function, DUF601 (DUF601) A. thaliana TAIR10 2019   Chr4: 1790440-1792458
AT1G46696 (1 of 4) PF04642 - Protein of unknown function, DUF601 (DUF601) A. thaliana TAIR10 2324   Chr1: 17261860-17264183
AT1G51172 (1 of 4) PF04642 - Protein of unknown function, DUF601 (DUF601) A. thaliana TAIR10 2367   Chr1: 18963205-18965571
AT2G15110 (1 of 4) PF04642 - Protein of unknown function, DUF601 (DUF601) A. thaliana TAIR10 2322   Chr2: 6554847-6557168
LOC_Os01g01200 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 3060   Chr1: 95499-98558
LOC_Os01g13960 retrotransposon protein, putative, unclassified, expressed O. sativa v7.0 4302   Chr1: 7823251-7827552
LOC_Os01g16480 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 6952   Chr1: 9352449-9359400
LOC_Os01g29260 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2965   Chr1: 16400629-16403593
LOC_Os01g32510 retrotransposon protein, putative, unclassified, expressed O. sativa v7.0 4464   Chr1: 17827164-17831627
LOC_Os01g36440 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2064   Chr1: 20228302-20230365
LOC_Os01g23560 retrotransposon protein, putative, unclassified, expressed O. sativa v7.0 1783   Chr1: 13228071-13229853
LOC_Os01g24330 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2759   Chr1: 13705077-13707835
LOC_Os01g27930 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 3149   Chr1: 15611374-15614522
LOC_Os01g39740 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 3053   Chr1: 22408357-22411409
LOC_Os01g41080 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 3073   Chr1: 23264627-23267699
LOC_Os01g71660 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2254   Chr1: 41527311-41529564
LOC_Os10g02150 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2968   Chr10: 732949-735916
LOC_Os01g68340 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2057   Chr1: 39710856-39712912
LOC_Os10g15180 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2871   Chr10: 8061992-8064862
LOC_Os10g20220 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2862   Chr10: 10150320-10153181
LOC_Os10g03120 retrotransposon protein, putative, unclassified, expressed O. sativa v7.0 2461   Chr10: 1318060-1320520
LOC_Os10g32260 retrotransposon protein, putative, unclassified, expressed O. sativa v7.0 3020   Chr10: 16932807-16935826
LOC_Os10g34650 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 5792   Chr10: 18463481-18469272
LOC_Os10g34090 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2837   Chr10: 18196226-18199062
LOC_Os10g25070 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2134   Chr10: 12903596-12905729
LOC_Os10g40190 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2914   Chr10: 21513886-21516799
LOC_Os11g11280 retrotransposon protein, putative, unclassified, expressed O. sativa v7.0 2989   Chr11: 6246578-6249566
LOC_Os11g13480 (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) O. sativa v7.0 2154   Chr11: 7381866-7384019
LOC_Os11g14450 retrotransposon protein, putative, unclassified, expressed O. sativa v7.0 2141   Chr11: 8112034-8114174
LOC_Os11g17160 retrotransposon protein, putative, unclassified, expressed O. sativa v7.0 4207   Chr11: 9526180-9530386

223 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT4G03830.1 A. thaliana TAIR10 123335525 retrotransposon protein, putative, unclassified, expressed 4 5275 Viridiplantae
AT1G46696.1 A. thaliana TAIR10 123335525 retrotransposon protein, putative, unclassified, expressed 4 5275 Viridiplantae
AT1G51172.1 A. thaliana TAIR10 123335525 retrotransposon protein, putative, unclassified, expressed 4 5275 Viridiplantae
AT2G15110.1 A. thaliana TAIR10 123335525 retrotransposon protein, putative, unclassified, expressed 4 5275 Viridiplantae
LOC_Os11g32000.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os10g03120.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os10g20220.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os10g15180.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g68340.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os10g02150.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g71660.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g41080.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g39740.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g27930.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g24330.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g23560.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g36440.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g32510.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g29260.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g16480.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g13960.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os01g01200.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os10g32260.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os10g34090.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os10g25070.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os10g40190.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os11g11280.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os11g13480.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os11g14450.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae
LOC_Os11g17160.1 O. sativa v7.0 123335525 retrotransposon protein, putative, unclassified, expressed 195 5275 Viridiplantae