Gene : LOC_Os01g27930 O. sativa v7.0
Defline:  (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  1927
Name:  ? LOC_Os01g27930 Secondary Identifier:  ? PAC:33121463
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os01g27930 0.5kb upstream 0.5kb upstream 3649 true Chr1: 15610874-15614522 Oryza sativa
LOC_Os01g27930 0.5kb upstream 0.5kb upstream 500 false Chr1: 15610874-15611373 Oryza sativa
LOC_Os01g27930 0.5kb downstream 0.5kb downstream 3649 true Chr1: 15611374-15615022 Oryza sativa
LOC_Os01g27930 0.5kb downstream 0.5kb downstream 500 false Chr1: 15614523-15615022 Oryza sativa
LOC_Os01g27930 1.0kb upstream 1.0kb upstream 4149 true Chr1: 15610374-15614522 Oryza sativa
LOC_Os01g27930 1.0kb upstream 1.0kb upstream 1000 false Chr1: 15610374-15611373 Oryza sativa
LOC_Os01g27930 1.0kb downstream 1.0kb downstream 4149 true Chr1: 15611374-15615522 Oryza sativa
LOC_Os01g27930 1.0kb downstream 1.0kb downstream 1000 false Chr1: 15614523-15615522 Oryza sativa
LOC_Os01g27930 2.0kb upstream 2.0kb upstream 5149 true Chr1: 15609374-15614522 Oryza sativa
LOC_Os01g27930 2.0kb upstream 2.0kb upstream 2000 false Chr1: 15609374-15611373 Oryza sativa
LOC_Os01g27930 2.0kb downstream 2.0kb downstream 5149 true Chr1: 15611374-15616522 Oryza sativa
LOC_Os01g27930 2.0kb downstream 2.0kb downstream 2000 false Chr1: 15614523-15616522 Oryza sativa
LOC_Os01g27930 5.0kb upstream 5.0kb upstream 8149 true Chr1: 15606374-15614522 Oryza sativa
LOC_Os01g27930 5.0kb upstream 5.0kb upstream 5000 false Chr1: 15606374-15611373 Oryza sativa
LOC_Os01g27930 5.0kb downstream 5.0kb downstream 8149 true Chr1: 15611374-15619522 Oryza sativa
LOC_Os01g27930 5.0kb downstream 5.0kb downstream 5000 false Chr1: 15614523-15619522 Oryza sativa
LOC_Os01g27930 10.0kb upstream 10.0kb upstream 13149 true Chr1: 15601374-15614522 Oryza sativa
LOC_Os01g27930 10.0kb upstream 10.0kb upstream 10000 false Chr1: 15601374-15611373 Oryza sativa
LOC_Os01g27930 10.0kb downstream 10.0kb downstream 13149 true Chr1: 15611374-15624522 Oryza sativa
LOC_Os01g27930 10.0kb downstream 10.0kb downstream 10000 false Chr1: 15614523-15624522 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027888 5273 Angiosperm View MSA
124564734 5269 Grass View MSA
121297470 5274 Embryophyte View MSA
123335525 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain