Gene : LOC_Os11g11280 O. sativa v7.0
Defline:  retrotransposon protein, putative, unclassified, expressed Genomic Order:  849
Name:  ? LOC_Os11g11280 Secondary Identifier:  ? PAC:33161523
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os11g11280 0.5kb upstream 0.5kb upstream 3489 true Chr11: 6246078-6249566 Oryza sativa
LOC_Os11g11280 0.5kb upstream 0.5kb upstream 500 false Chr11: 6246078-6246577 Oryza sativa
LOC_Os11g11280 0.5kb downstream 0.5kb downstream 3489 true Chr11: 6246578-6250066 Oryza sativa
LOC_Os11g11280 0.5kb downstream 0.5kb downstream 500 false Chr11: 6249567-6250066 Oryza sativa
LOC_Os11g11280 1.0kb upstream 1.0kb upstream 3989 true Chr11: 6245578-6249566 Oryza sativa
LOC_Os11g11280 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6245578-6246577 Oryza sativa
LOC_Os11g11280 1.0kb downstream 1.0kb downstream 3989 true Chr11: 6246578-6250566 Oryza sativa
LOC_Os11g11280 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6249567-6250566 Oryza sativa
LOC_Os11g11280 2.0kb upstream 2.0kb upstream 4989 true Chr11: 6244578-6249566 Oryza sativa
LOC_Os11g11280 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6244578-6246577 Oryza sativa
LOC_Os11g11280 2.0kb downstream 2.0kb downstream 4989 true Chr11: 6246578-6251566 Oryza sativa
LOC_Os11g11280 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6249567-6251566 Oryza sativa
LOC_Os11g11280 5.0kb upstream 5.0kb upstream 7989 true Chr11: 6241578-6249566 Oryza sativa
LOC_Os11g11280 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6241578-6246577 Oryza sativa
LOC_Os11g11280 5.0kb downstream 5.0kb downstream 7989 true Chr11: 6246578-6254566 Oryza sativa
LOC_Os11g11280 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6249567-6254566 Oryza sativa
LOC_Os11g11280 10.0kb upstream 10.0kb upstream 12989 true Chr11: 6236578-6249566 Oryza sativa
LOC_Os11g11280 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6236578-6246577 Oryza sativa
LOC_Os11g11280 10.0kb downstream 10.0kb downstream 12989 true Chr11: 6246578-6259566 Oryza sativa
LOC_Os11g11280 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6249567-6259566 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027888 5273 Angiosperm View MSA
124564734 5269 Grass View MSA
121297470 5274 Embryophyte View MSA
123335525 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain