Gene : LOC_Os01g39740 O. sativa v7.0
Defline:  (1 of 461) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  2527
Name:  ? LOC_Os01g39740 Secondary Identifier:  ? PAC:33123302
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os01g39740 0.5kb upstream 0.5kb upstream 3553 true Chr1: 22408357-22411909 Oryza sativa
LOC_Os01g39740 0.5kb upstream 0.5kb upstream 500 false Chr1: 22411410-22411909 Oryza sativa
LOC_Os01g39740 0.5kb downstream 0.5kb downstream 3553 true Chr1: 22407857-22411409 Oryza sativa
LOC_Os01g39740 0.5kb downstream 0.5kb downstream 500 false Chr1: 22407857-22408356 Oryza sativa
LOC_Os01g39740 1.0kb upstream 1.0kb upstream 4053 true Chr1: 22408357-22412409 Oryza sativa
LOC_Os01g39740 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22411410-22412409 Oryza sativa
LOC_Os01g39740 1.0kb downstream 1.0kb downstream 4053 true Chr1: 22407357-22411409 Oryza sativa
LOC_Os01g39740 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22407357-22408356 Oryza sativa
LOC_Os01g39740 2.0kb upstream 2.0kb upstream 5053 true Chr1: 22408357-22413409 Oryza sativa
LOC_Os01g39740 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22411410-22413409 Oryza sativa
LOC_Os01g39740 2.0kb downstream 2.0kb downstream 5053 true Chr1: 22406357-22411409 Oryza sativa
LOC_Os01g39740 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22406357-22408356 Oryza sativa
LOC_Os01g39740 5.0kb upstream 5.0kb upstream 8053 true Chr1: 22408357-22416409 Oryza sativa
LOC_Os01g39740 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22411410-22416409 Oryza sativa
LOC_Os01g39740 5.0kb downstream 5.0kb downstream 8053 true Chr1: 22403357-22411409 Oryza sativa
LOC_Os01g39740 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22403357-22408356 Oryza sativa
LOC_Os01g39740 10.0kb upstream 10.0kb upstream 13053 true Chr1: 22408357-22421409 Oryza sativa
LOC_Os01g39740 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22411410-22421409 Oryza sativa
LOC_Os01g39740 10.0kb downstream 10.0kb downstream 13053 true Chr1: 22398357-22411409 Oryza sativa
LOC_Os01g39740 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22398357-22408356 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027888 5273 Angiosperm View MSA
124564734 5269 Grass View MSA
121297470 5274 Embryophyte View MSA
123335525 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain