Gene : Carub.0002s0860 C. rubella v1.1
Defline:  (1 of 2) PTHR10252//PTHR10252:SF48 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED Genomic Order:  860
Name:  ? Carub.0002s0860 Secondary Identifier:  ? PAC:39243669
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0860 0.5kb upstream 0.5kb upstream 1938 true scaffold_2: 4132279-4134216 Capsella rubella
Carub.0002s0860 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4133717-4134216 Capsella rubella
Carub.0002s0860 0.5kb downstream 0.5kb downstream 1938 true scaffold_2: 4131779-4133716 Capsella rubella
Carub.0002s0860 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4131779-4132278 Capsella rubella
Carub.0002s0860 1.0kb upstream 1.0kb upstream 2438 true scaffold_2: 4132279-4134716 Capsella rubella
Carub.0002s0860 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4133717-4134716 Capsella rubella
Carub.0002s0860 1.0kb downstream 1.0kb downstream 2438 true scaffold_2: 4131279-4133716 Capsella rubella
Carub.0002s0860 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4131279-4132278 Capsella rubella
Carub.0002s0860 2.0kb upstream 2.0kb upstream 3438 true scaffold_2: 4132279-4135716 Capsella rubella
Carub.0002s0860 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4133717-4135716 Capsella rubella
Carub.0002s0860 2.0kb downstream 2.0kb downstream 3438 true scaffold_2: 4130279-4133716 Capsella rubella
Carub.0002s0860 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4130279-4132278 Capsella rubella
Carub.0002s0860 5.0kb upstream 5.0kb upstream 6438 true scaffold_2: 4132279-4138716 Capsella rubella
Carub.0002s0860 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4133717-4138716 Capsella rubella
Carub.0002s0860 5.0kb downstream 5.0kb downstream 6438 true scaffold_2: 4127279-4133716 Capsella rubella
Carub.0002s0860 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4127279-4132278 Capsella rubella
Carub.0002s0860 10.0kb upstream 10.0kb upstream 11438 true scaffold_2: 4132279-4143716 Capsella rubella
Carub.0002s0860 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4133717-4143716 Capsella rubella
Carub.0002s0860 10.0kb downstream 10.0kb downstream 11438 true scaffold_2: 4122279-4133716 Capsella rubella
Carub.0002s0860 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4122279-4132278 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375780 5261 Brassicaceae View MSA
123835897 5264 Brassicales-Malvales View MSA
124322105 5266 SBM View MSA
124251136 5268 Malvidae View MSA
124071144 5270 Rosid View MSA
123743416 5271 Pentapetalae View MSA
122794744 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain