Gene : Carub.0006s1104 C. rubella v1.1
Defline:  (1 of 1) PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Genomic Order:  1104
Name:  ? Carub.0006s1104 Secondary Identifier:  ? PAC:39247609
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1104 0.5kb upstream 0.5kb upstream 3875 true scaffold_6: 4055062-4058936 Capsella rubella
Carub.0006s1104 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4055062-4055561 Capsella rubella
Carub.0006s1104 0.5kb downstream 0.5kb downstream 3875 true scaffold_6: 4055562-4059436 Capsella rubella
Carub.0006s1104 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4058937-4059436 Capsella rubella
Carub.0006s1104 1.0kb upstream 1.0kb upstream 4375 true scaffold_6: 4054562-4058936 Capsella rubella
Carub.0006s1104 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4054562-4055561 Capsella rubella
Carub.0006s1104 1.0kb downstream 1.0kb downstream 4375 true scaffold_6: 4055562-4059936 Capsella rubella
Carub.0006s1104 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4058937-4059936 Capsella rubella
Carub.0006s1104 2.0kb upstream 2.0kb upstream 5375 true scaffold_6: 4053562-4058936 Capsella rubella
Carub.0006s1104 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4053562-4055561 Capsella rubella
Carub.0006s1104 2.0kb downstream 2.0kb downstream 5375 true scaffold_6: 4055562-4060936 Capsella rubella
Carub.0006s1104 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4058937-4060936 Capsella rubella
Carub.0006s1104 5.0kb upstream 5.0kb upstream 8375 true scaffold_6: 4050562-4058936 Capsella rubella
Carub.0006s1104 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4050562-4055561 Capsella rubella
Carub.0006s1104 5.0kb downstream 5.0kb downstream 8375 true scaffold_6: 4055562-4063936 Capsella rubella
Carub.0006s1104 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4058937-4063936 Capsella rubella
Carub.0006s1104 10.0kb upstream 10.0kb upstream 13375 true scaffold_6: 4045562-4058936 Capsella rubella
Carub.0006s1104 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4045562-4055561 Capsella rubella
Carub.0006s1104 10.0kb downstream 10.0kb downstream 13375 true scaffold_6: 4055562-4068936 Capsella rubella
Carub.0006s1104 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4058937-4068936 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027558 5273 Angiosperm View MSA
122372240 5261 Brassicaceae View MSA
123800324 5264 Brassicales-Malvales View MSA
124297748 5266 SBM View MSA
124149560 5268 Malvidae View MSA
123875346 5270 Rosid View MSA
123750117 5271 Pentapetalae View MSA
122773480 5272 Eudicot View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain