Gene : Carub.0006s1103 C. rubella v1.1
Defline:  (1 of 2) PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED Genomic Order:  1103
Name:  ? Carub.0006s1103 Secondary Identifier:  ? PAC:39248538
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1103 0.5kb upstream 0.5kb upstream 3227 true scaffold_6: 4045969-4049195 Capsella rubella
Carub.0006s1103 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4048696-4049195 Capsella rubella
Carub.0006s1103 0.5kb downstream 0.5kb downstream 3227 true scaffold_6: 4045469-4048695 Capsella rubella
Carub.0006s1103 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4045469-4045968 Capsella rubella
Carub.0006s1103 1.0kb upstream 1.0kb upstream 3727 true scaffold_6: 4045969-4049695 Capsella rubella
Carub.0006s1103 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4048696-4049695 Capsella rubella
Carub.0006s1103 1.0kb downstream 1.0kb downstream 3727 true scaffold_6: 4044969-4048695 Capsella rubella
Carub.0006s1103 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4044969-4045968 Capsella rubella
Carub.0006s1103 2.0kb upstream 2.0kb upstream 4727 true scaffold_6: 4045969-4050695 Capsella rubella
Carub.0006s1103 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4048696-4050695 Capsella rubella
Carub.0006s1103 2.0kb downstream 2.0kb downstream 4727 true scaffold_6: 4043969-4048695 Capsella rubella
Carub.0006s1103 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4043969-4045968 Capsella rubella
Carub.0006s1103 5.0kb upstream 5.0kb upstream 7727 true scaffold_6: 4045969-4053695 Capsella rubella
Carub.0006s1103 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4048696-4053695 Capsella rubella
Carub.0006s1103 5.0kb downstream 5.0kb downstream 7727 true scaffold_6: 4040969-4048695 Capsella rubella
Carub.0006s1103 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4040969-4045968 Capsella rubella
Carub.0006s1103 10.0kb upstream 10.0kb upstream 12727 true scaffold_6: 4045969-4058695 Capsella rubella
Carub.0006s1103 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4048696-4058695 Capsella rubella
Carub.0006s1103 10.0kb downstream 10.0kb downstream 12727 true scaffold_6: 4035969-4048695 Capsella rubella
Carub.0006s1103 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4035969-4045968 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369255 5261 Brassicaceae View MSA
123828025 5264 Brassicales-Malvales View MSA
124338616 5266 SBM View MSA
124249292 5268 Malvidae View MSA
124064408 5270 Rosid View MSA
123744202 5271 Pentapetalae View MSA
122796368 5272 Eudicot View MSA
122043560 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain