Gene : Carub.0007s1610 C. rubella v1.1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF56 - HVA22-LIKE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  1610
Name:  ? Carub.0007s1610 Secondary Identifier:  ? PAC:39233990
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1610 0.5kb upstream 0.5kb upstream 1612 true scaffold_7: 5981598-5983209 Capsella rubella
Carub.0007s1610 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5982710-5983209 Capsella rubella
Carub.0007s1610 0.5kb downstream 0.5kb downstream 1612 true scaffold_7: 5981098-5982709 Capsella rubella
Carub.0007s1610 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5981098-5981597 Capsella rubella
Carub.0007s1610 1.0kb upstream 1.0kb upstream 2112 true scaffold_7: 5981598-5983709 Capsella rubella
Carub.0007s1610 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5982710-5983709 Capsella rubella
Carub.0007s1610 1.0kb downstream 1.0kb downstream 2112 true scaffold_7: 5980598-5982709 Capsella rubella
Carub.0007s1610 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5980598-5981597 Capsella rubella
Carub.0007s1610 2.0kb upstream 2.0kb upstream 3112 true scaffold_7: 5981598-5984709 Capsella rubella
Carub.0007s1610 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5982710-5984709 Capsella rubella
Carub.0007s1610 2.0kb downstream 2.0kb downstream 3112 true scaffold_7: 5979598-5982709 Capsella rubella
Carub.0007s1610 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5979598-5981597 Capsella rubella
Carub.0007s1610 5.0kb upstream 5.0kb upstream 6112 true scaffold_7: 5981598-5987709 Capsella rubella
Carub.0007s1610 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5982710-5987709 Capsella rubella
Carub.0007s1610 5.0kb downstream 5.0kb downstream 6112 true scaffold_7: 5976598-5982709 Capsella rubella
Carub.0007s1610 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5976598-5981597 Capsella rubella
Carub.0007s1610 10.0kb upstream 10.0kb upstream 11112 true scaffold_7: 5981598-5992709 Capsella rubella
Carub.0007s1610 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5982710-5992709 Capsella rubella
Carub.0007s1610 10.0kb downstream 10.0kb downstream 11112 true scaffold_7: 5971598-5982709 Capsella rubella
Carub.0007s1610 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5971598-5981597 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380293 5261 Brassicaceae View MSA
123839271 5264 Brassicales-Malvales View MSA
124322593 5266 SBM View MSA
124248122 5268 Malvidae View MSA
124062938 5270 Rosid View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain