Gene : Carub.0006s1378 C. rubella v1.1
Defline:  (1 of 1) PTHR31673//PTHR31673:SF2 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 4 Genomic Order:  1378
Name:  ? Carub.0006s1378 Secondary Identifier:  ? PAC:39247528
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1378 0.5kb upstream 0.5kb upstream 2327 true scaffold_6: 5127768-5130094 Capsella rubella
Carub.0006s1378 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5127768-5128267 Capsella rubella
Carub.0006s1378 0.5kb downstream 0.5kb downstream 2327 true scaffold_6: 5128268-5130594 Capsella rubella
Carub.0006s1378 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5130095-5130594 Capsella rubella
Carub.0006s1378 1.0kb upstream 1.0kb upstream 2827 true scaffold_6: 5127268-5130094 Capsella rubella
Carub.0006s1378 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5127268-5128267 Capsella rubella
Carub.0006s1378 1.0kb downstream 1.0kb downstream 2827 true scaffold_6: 5128268-5131094 Capsella rubella
Carub.0006s1378 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5130095-5131094 Capsella rubella
Carub.0006s1378 2.0kb upstream 2.0kb upstream 3827 true scaffold_6: 5126268-5130094 Capsella rubella
Carub.0006s1378 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5126268-5128267 Capsella rubella
Carub.0006s1378 2.0kb downstream 2.0kb downstream 3827 true scaffold_6: 5128268-5132094 Capsella rubella
Carub.0006s1378 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5130095-5132094 Capsella rubella
Carub.0006s1378 5.0kb upstream 5.0kb upstream 6827 true scaffold_6: 5123268-5130094 Capsella rubella
Carub.0006s1378 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5123268-5128267 Capsella rubella
Carub.0006s1378 5.0kb downstream 5.0kb downstream 6827 true scaffold_6: 5128268-5135094 Capsella rubella
Carub.0006s1378 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5130095-5135094 Capsella rubella
Carub.0006s1378 10.0kb upstream 10.0kb upstream 11827 true scaffold_6: 5118268-5130094 Capsella rubella
Carub.0006s1378 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5118268-5128267 Capsella rubella
Carub.0006s1378 10.0kb downstream 10.0kb downstream 11827 true scaffold_6: 5128268-5140094 Capsella rubella
Carub.0006s1378 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5130095-5140094 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369543 5261 Brassicaceae View MSA
123833441 5264 Brassicales-Malvales View MSA
124348545 5266 SBM View MSA
124248758 5268 Malvidae View MSA
124068379 5270 Rosid View MSA
123742644 5271 Pentapetalae View MSA
122793742 5272 Eudicot View MSA
122043541 5273 Angiosperm View MSA
121349086 5274 Embryophyte View MSA
123381159 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain