Gene : Carub.0007s1617 C. rubella v1.1
Defline:  (1 of 2) PF14968 - Coiled coil protein 84 (CCDC84) Genomic Order:  1617
Name:  ? Carub.0007s1617 Secondary Identifier:  ? PAC:39232515
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1617 0.5kb upstream 0.5kb upstream 1549 true scaffold_7: 5994872-5996420 Capsella rubella
Carub.0007s1617 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5995921-5996420 Capsella rubella
Carub.0007s1617 0.5kb downstream 0.5kb downstream 1549 true scaffold_7: 5994372-5995920 Capsella rubella
Carub.0007s1617 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5994372-5994871 Capsella rubella
Carub.0007s1617 1.0kb upstream 1.0kb upstream 2049 true scaffold_7: 5994872-5996920 Capsella rubella
Carub.0007s1617 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5995921-5996920 Capsella rubella
Carub.0007s1617 1.0kb downstream 1.0kb downstream 2049 true scaffold_7: 5993872-5995920 Capsella rubella
Carub.0007s1617 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5993872-5994871 Capsella rubella
Carub.0007s1617 2.0kb upstream 2.0kb upstream 3049 true scaffold_7: 5994872-5997920 Capsella rubella
Carub.0007s1617 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5995921-5997920 Capsella rubella
Carub.0007s1617 2.0kb downstream 2.0kb downstream 3049 true scaffold_7: 5992872-5995920 Capsella rubella
Carub.0007s1617 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5992872-5994871 Capsella rubella
Carub.0007s1617 5.0kb upstream 5.0kb upstream 6049 true scaffold_7: 5994872-6000920 Capsella rubella
Carub.0007s1617 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5995921-6000920 Capsella rubella
Carub.0007s1617 5.0kb downstream 5.0kb downstream 6049 true scaffold_7: 5989872-5995920 Capsella rubella
Carub.0007s1617 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5989872-5994871 Capsella rubella
Carub.0007s1617 10.0kb upstream 10.0kb upstream 11049 true scaffold_7: 5994872-6005920 Capsella rubella
Carub.0007s1617 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5995921-6005920 Capsella rubella
Carub.0007s1617 10.0kb downstream 10.0kb downstream 11049 true scaffold_7: 5984872-5995920 Capsella rubella
Carub.0007s1617 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5984872-5994871 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335391 5261 Brassicaceae Singleton cluster - no MSA
123776160 5264 Brassicales-Malvales Singleton cluster - no MSA
124274554 5266 SBM Singleton cluster - no MSA
124252746 5268 Malvidae View MSA
124039893 5270 Rosid View MSA
123611563 5271 Pentapetalae View MSA
122646123 5272 Eudicot View MSA
122050538 5273 Angiosperm View MSA
121311976 5274 Embryophyte View MSA
123349198 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain