Gene : Carub.0007s1662 C. rubella v1.1
Defline:  (1 of 1) PTHR22931//PTHR22931:SF26 - PHOSPHOENOLPYRUVATE DIKINASE-RELATED // ALPHA-GLUCAN WATER DIKINASE 2 Genomic Order:  1662
Name:  ? Carub.0007s1662 Secondary Identifier:  ? PAC:39233991
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6724 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1662 0.5kb upstream 0.5kb upstream 8344 true scaffold_7: 6182140-6190483 Capsella rubella
Carub.0007s1662 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6189984-6190483 Capsella rubella
Carub.0007s1662 0.5kb downstream 0.5kb downstream 8344 true scaffold_7: 6181640-6189983 Capsella rubella
Carub.0007s1662 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6181640-6182139 Capsella rubella
Carub.0007s1662 1.0kb upstream 1.0kb upstream 8844 true scaffold_7: 6182140-6190983 Capsella rubella
Carub.0007s1662 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6189984-6190983 Capsella rubella
Carub.0007s1662 1.0kb downstream 1.0kb downstream 8844 true scaffold_7: 6181140-6189983 Capsella rubella
Carub.0007s1662 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6181140-6182139 Capsella rubella
Carub.0007s1662 2.0kb upstream 2.0kb upstream 9844 true scaffold_7: 6182140-6191983 Capsella rubella
Carub.0007s1662 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6189984-6191983 Capsella rubella
Carub.0007s1662 2.0kb downstream 2.0kb downstream 9844 true scaffold_7: 6180140-6189983 Capsella rubella
Carub.0007s1662 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6180140-6182139 Capsella rubella
Carub.0007s1662 5.0kb upstream 5.0kb upstream 12844 true scaffold_7: 6182140-6194983 Capsella rubella
Carub.0007s1662 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6189984-6194983 Capsella rubella
Carub.0007s1662 5.0kb downstream 5.0kb downstream 12844 true scaffold_7: 6177140-6189983 Capsella rubella
Carub.0007s1662 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6177140-6182139 Capsella rubella
Carub.0007s1662 10.0kb upstream 10.0kb upstream 17844 true scaffold_7: 6182140-6199983 Capsella rubella
Carub.0007s1662 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6189984-6199983 Capsella rubella
Carub.0007s1662 10.0kb downstream 10.0kb downstream 17844 true scaffold_7: 6172140-6189983 Capsella rubella
Carub.0007s1662 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6172140-6182139 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363854 5261 Brassicaceae View MSA
123832740 5264 Brassicales-Malvales View MSA
124343081 5266 SBM View MSA
124244295 5268 Malvidae View MSA
124037198 5270 Rosid View MSA
123610225 5271 Pentapetalae View MSA
122795475 5272 Eudicot View MSA
122050212 5273 Angiosperm View MSA
123429091 5275 Viridiplantae View MSA
121311800 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain