Gene : Carub.0006s1380 C. rubella v1.1

Defline:  (1 of 5) 5.4.99.30 - UDP-arabinopyranose mutase Genomic Order:  1380
Name:  ? Carub.0006s1380 Secondary Identifier:  ? PAC:39246512

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1380 0.5kb upstream 0.5kb upstream 2647 true scaffold_6: 5135332-5137978 Capsella rubella
Carub.0006s1380 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5135332-5135831 Capsella rubella
Carub.0006s1380 0.5kb downstream 0.5kb downstream 2647 true scaffold_6: 5135832-5138478 Capsella rubella
Carub.0006s1380 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5137979-5138478 Capsella rubella
Carub.0006s1380 1.0kb upstream 1.0kb upstream 3147 true scaffold_6: 5134832-5137978 Capsella rubella
Carub.0006s1380 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5134832-5135831 Capsella rubella
Carub.0006s1380 1.0kb downstream 1.0kb downstream 3147 true scaffold_6: 5135832-5138978 Capsella rubella
Carub.0006s1380 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5137979-5138978 Capsella rubella
Carub.0006s1380 2.0kb upstream 2.0kb upstream 4147 true scaffold_6: 5133832-5137978 Capsella rubella
Carub.0006s1380 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5133832-5135831 Capsella rubella
Carub.0006s1380 2.0kb downstream 2.0kb downstream 4147 true scaffold_6: 5135832-5139978 Capsella rubella
Carub.0006s1380 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5137979-5139978 Capsella rubella
Carub.0006s1380 5.0kb upstream 5.0kb upstream 7147 true scaffold_6: 5130832-5137978 Capsella rubella
Carub.0006s1380 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5130832-5135831 Capsella rubella
Carub.0006s1380 5.0kb downstream 5.0kb downstream 7147 true scaffold_6: 5135832-5142978 Capsella rubella
Carub.0006s1380 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5137979-5142978 Capsella rubella
Carub.0006s1380 10.0kb upstream 10.0kb upstream 12147 true scaffold_6: 5125832-5137978 Capsella rubella
Carub.0006s1380 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5125832-5135831 Capsella rubella
Carub.0006s1380 10.0kb downstream 10.0kb downstream 12147 true scaffold_6: 5135832-5147978 Capsella rubella
Carub.0006s1380 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5137979-5147978 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365871 5261 Brassicaceae View MSA
123837947 5264 Brassicales-Malvales View MSA
124344090 5266 SBM View MSA
124253842 5268 Malvidae View MSA
124072741 5270 Rosid View MSA
123747058 5271 Pentapetalae View MSA
122796837 5272 Eudicot View MSA
122049597 5273 Angiosperm View MSA
121348829 5274 Embryophyte View MSA
123424490 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain