Gene : Carub.0007s1694 C. rubella v1.1
Defline:  (1 of 1) PTHR10992//PTHR10992:SF866 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1694
Name:  ? Carub.0007s1694 Secondary Identifier:  ? PAC:39232263
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY0-1319 Capsella rubella pathologic  
Crubella PWY4FS-7 Capsella rubella pathologic  
Crubella PWY-7411 Capsella rubella pathologic  
Crubella PWY-7417 Capsella rubella pathologic  
Crubella TRIGLSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1694 0.5kb upstream 0.5kb upstream 3300 true scaffold_7: 6299567-6302866 Capsella rubella
Carub.0007s1694 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6302367-6302866 Capsella rubella
Carub.0007s1694 0.5kb downstream 0.5kb downstream 3300 true scaffold_7: 6299067-6302366 Capsella rubella
Carub.0007s1694 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6299067-6299566 Capsella rubella
Carub.0007s1694 1.0kb upstream 1.0kb upstream 3800 true scaffold_7: 6299567-6303366 Capsella rubella
Carub.0007s1694 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6302367-6303366 Capsella rubella
Carub.0007s1694 1.0kb downstream 1.0kb downstream 3800 true scaffold_7: 6298567-6302366 Capsella rubella
Carub.0007s1694 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6298567-6299566 Capsella rubella
Carub.0007s1694 2.0kb upstream 2.0kb upstream 4800 true scaffold_7: 6299567-6304366 Capsella rubella
Carub.0007s1694 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6302367-6304366 Capsella rubella
Carub.0007s1694 2.0kb downstream 2.0kb downstream 4800 true scaffold_7: 6297567-6302366 Capsella rubella
Carub.0007s1694 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6297567-6299566 Capsella rubella
Carub.0007s1694 5.0kb upstream 5.0kb upstream 7800 true scaffold_7: 6299567-6307366 Capsella rubella
Carub.0007s1694 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6302367-6307366 Capsella rubella
Carub.0007s1694 5.0kb downstream 5.0kb downstream 7800 true scaffold_7: 6294567-6302366 Capsella rubella
Carub.0007s1694 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6294567-6299566 Capsella rubella
Carub.0007s1694 10.0kb upstream 10.0kb upstream 12800 true scaffold_7: 6299567-6312366 Capsella rubella
Carub.0007s1694 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6302367-6312366 Capsella rubella
Carub.0007s1694 10.0kb downstream 10.0kb downstream 12800 true scaffold_7: 6289567-6302366 Capsella rubella
Carub.0007s1694 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6289567-6299566 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364602 5261 Brassicaceae View MSA
123840000 5264 Brassicales-Malvales View MSA
124344774 5266 SBM View MSA
124237446 5268 Malvidae View MSA
124066617 5270 Rosid View MSA
123747247 5271 Pentapetalae View MSA
122792153 5272 Eudicot View MSA
122042998 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121347708 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain