Gene : Carub.0007s1236 C. rubella v1.1
Defline:  (1 of 20) PF00560//PF13855 - Leucine Rich Repeat (LRR_1) // Leucine rich repeat (LRR_8) Genomic Order:  1236
Name:  ? Carub.0007s1236 Secondary Identifier:  ? PAC:39233300
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1236 0.5kb upstream 0.5kb upstream 1688 true scaffold_7: 4721683-4723370 Capsella rubella
Carub.0007s1236 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4721683-4722182 Capsella rubella
Carub.0007s1236 0.5kb downstream 0.5kb downstream 1688 true scaffold_7: 4722183-4723870 Capsella rubella
Carub.0007s1236 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4723371-4723870 Capsella rubella
Carub.0007s1236 1.0kb upstream 1.0kb upstream 2188 true scaffold_7: 4721183-4723370 Capsella rubella
Carub.0007s1236 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4721183-4722182 Capsella rubella
Carub.0007s1236 1.0kb downstream 1.0kb downstream 2188 true scaffold_7: 4722183-4724370 Capsella rubella
Carub.0007s1236 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4723371-4724370 Capsella rubella
Carub.0007s1236 2.0kb upstream 2.0kb upstream 3188 true scaffold_7: 4720183-4723370 Capsella rubella
Carub.0007s1236 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4720183-4722182 Capsella rubella
Carub.0007s1236 2.0kb downstream 2.0kb downstream 3188 true scaffold_7: 4722183-4725370 Capsella rubella
Carub.0007s1236 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4723371-4725370 Capsella rubella
Carub.0007s1236 5.0kb upstream 5.0kb upstream 6188 true scaffold_7: 4717183-4723370 Capsella rubella
Carub.0007s1236 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4717183-4722182 Capsella rubella
Carub.0007s1236 5.0kb downstream 5.0kb downstream 6188 true scaffold_7: 4722183-4728370 Capsella rubella
Carub.0007s1236 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4723371-4728370 Capsella rubella
Carub.0007s1236 10.0kb upstream 10.0kb upstream 11188 true scaffold_7: 4712183-4723370 Capsella rubella
Carub.0007s1236 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4712183-4722182 Capsella rubella
Carub.0007s1236 10.0kb downstream 10.0kb downstream 11188 true scaffold_7: 4722183-4733370 Capsella rubella
Carub.0007s1236 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4723371-4733370 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365723 5261 Brassicaceae View MSA
123828849 5264 Brassicales-Malvales View MSA
124345745 5266 SBM View MSA
124239773 5268 Malvidae View MSA
124060445 5270 Rosid View MSA
123737371 5271 Pentapetalae View MSA
122793115 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain