Gene : Carub.0007s1560 C. rubella v1.1
Defline:  (1 of 6) PTHR13935//PTHR13935:SF54 - ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED // TRANSCRIPTION FACTOR BHLH118-RELATED Genomic Order:  1560
Name:  ? Carub.0007s1560 Secondary Identifier:  ? PAC:39235231
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1560 0.5kb upstream 0.5kb upstream 2241 true scaffold_7: 5819328-5821568 Capsella rubella
Carub.0007s1560 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5821069-5821568 Capsella rubella
Carub.0007s1560 0.5kb downstream 0.5kb downstream 2241 true scaffold_7: 5818828-5821068 Capsella rubella
Carub.0007s1560 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5818828-5819327 Capsella rubella
Carub.0007s1560 1.0kb upstream 1.0kb upstream 2741 true scaffold_7: 5819328-5822068 Capsella rubella
Carub.0007s1560 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5821069-5822068 Capsella rubella
Carub.0007s1560 1.0kb downstream 1.0kb downstream 2741 true scaffold_7: 5818328-5821068 Capsella rubella
Carub.0007s1560 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5818328-5819327 Capsella rubella
Carub.0007s1560 2.0kb upstream 2.0kb upstream 3741 true scaffold_7: 5819328-5823068 Capsella rubella
Carub.0007s1560 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5821069-5823068 Capsella rubella
Carub.0007s1560 2.0kb downstream 2.0kb downstream 3741 true scaffold_7: 5817328-5821068 Capsella rubella
Carub.0007s1560 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5817328-5819327 Capsella rubella
Carub.0007s1560 5.0kb upstream 5.0kb upstream 6741 true scaffold_7: 5819328-5826068 Capsella rubella
Carub.0007s1560 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5821069-5826068 Capsella rubella
Carub.0007s1560 5.0kb downstream 5.0kb downstream 6741 true scaffold_7: 5814328-5821068 Capsella rubella
Carub.0007s1560 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5814328-5819327 Capsella rubella
Carub.0007s1560 10.0kb upstream 10.0kb upstream 11741 true scaffold_7: 5819328-5831068 Capsella rubella
Carub.0007s1560 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5821069-5831068 Capsella rubella
Carub.0007s1560 10.0kb downstream 10.0kb downstream 11741 true scaffold_7: 5809328-5821068 Capsella rubella
Carub.0007s1560 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5809328-5819327 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377156 5261 Brassicaceae View MSA
123837803 5264 Brassicales-Malvales View MSA
124351097 5266 SBM View MSA
124249323 5268 Malvidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain