Gene : Carub.0007s1198 C. rubella v1.1
Defline:  (1 of 3) K01592 - tyrosine decarboxylase (E4.1.1.25) Genomic Order:  1198
Name:  ? Carub.0007s1198 Secondary Identifier:  ? PAC:39233140
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6802 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1198 0.5kb upstream 0.5kb upstream 3807 true scaffold_7: 4595076-4598882 Capsella rubella
Carub.0007s1198 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4598383-4598882 Capsella rubella
Carub.0007s1198 0.5kb downstream 0.5kb downstream 3807 true scaffold_7: 4594576-4598382 Capsella rubella
Carub.0007s1198 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4594576-4595075 Capsella rubella
Carub.0007s1198 1.0kb upstream 1.0kb upstream 4307 true scaffold_7: 4595076-4599382 Capsella rubella
Carub.0007s1198 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4598383-4599382 Capsella rubella
Carub.0007s1198 1.0kb downstream 1.0kb downstream 4307 true scaffold_7: 4594076-4598382 Capsella rubella
Carub.0007s1198 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4594076-4595075 Capsella rubella
Carub.0007s1198 2.0kb upstream 2.0kb upstream 5307 true scaffold_7: 4595076-4600382 Capsella rubella
Carub.0007s1198 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4598383-4600382 Capsella rubella
Carub.0007s1198 2.0kb downstream 2.0kb downstream 5307 true scaffold_7: 4593076-4598382 Capsella rubella
Carub.0007s1198 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4593076-4595075 Capsella rubella
Carub.0007s1198 5.0kb upstream 5.0kb upstream 8307 true scaffold_7: 4595076-4603382 Capsella rubella
Carub.0007s1198 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4598383-4603382 Capsella rubella
Carub.0007s1198 5.0kb downstream 5.0kb downstream 8307 true scaffold_7: 4590076-4598382 Capsella rubella
Carub.0007s1198 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4590076-4595075 Capsella rubella
Carub.0007s1198 10.0kb upstream 10.0kb upstream 13307 true scaffold_7: 4595076-4608382 Capsella rubella
Carub.0007s1198 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4598383-4608382 Capsella rubella
Carub.0007s1198 10.0kb downstream 10.0kb downstream 13307 true scaffold_7: 4585076-4598382 Capsella rubella
Carub.0007s1198 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4585076-4595075 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374031 5261 Brassicaceae View MSA
123800671 5264 Brassicales-Malvales View MSA
124351475 5266 SBM View MSA
124253031 5268 Malvidae View MSA
124071819 5270 Rosid View MSA
123753365 5271 Pentapetalae View MSA
122794689 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain