Gene : Carub.0007s1629 C. rubella v1.1
Defline:  (1 of 29) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  1629
Name:  ? Carub.0007s1629 Secondary Identifier:  ? PAC:39234348
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1629 0.5kb upstream 0.5kb upstream 2490 true scaffold_7: 6043997-6046486 Capsella rubella
Carub.0007s1629 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6043997-6044496 Capsella rubella
Carub.0007s1629 0.5kb downstream 0.5kb downstream 2490 true scaffold_7: 6044497-6046986 Capsella rubella
Carub.0007s1629 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6046487-6046986 Capsella rubella
Carub.0007s1629 1.0kb upstream 1.0kb upstream 2990 true scaffold_7: 6043497-6046486 Capsella rubella
Carub.0007s1629 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6043497-6044496 Capsella rubella
Carub.0007s1629 1.0kb downstream 1.0kb downstream 2990 true scaffold_7: 6044497-6047486 Capsella rubella
Carub.0007s1629 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6046487-6047486 Capsella rubella
Carub.0007s1629 2.0kb upstream 2.0kb upstream 3990 true scaffold_7: 6042497-6046486 Capsella rubella
Carub.0007s1629 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6042497-6044496 Capsella rubella
Carub.0007s1629 2.0kb downstream 2.0kb downstream 3990 true scaffold_7: 6044497-6048486 Capsella rubella
Carub.0007s1629 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6046487-6048486 Capsella rubella
Carub.0007s1629 5.0kb upstream 5.0kb upstream 6990 true scaffold_7: 6039497-6046486 Capsella rubella
Carub.0007s1629 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6039497-6044496 Capsella rubella
Carub.0007s1629 5.0kb downstream 5.0kb downstream 6990 true scaffold_7: 6044497-6051486 Capsella rubella
Carub.0007s1629 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6046487-6051486 Capsella rubella
Carub.0007s1629 10.0kb upstream 10.0kb upstream 11990 true scaffold_7: 6034497-6046486 Capsella rubella
Carub.0007s1629 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6034497-6044496 Capsella rubella
Carub.0007s1629 10.0kb downstream 10.0kb downstream 11990 true scaffold_7: 6044497-6056486 Capsella rubella
Carub.0007s1629 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6046487-6056486 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377329 5261 Brassicaceae View MSA
123834292 5264 Brassicales-Malvales View MSA
124350257 5266 SBM View MSA
124247820 5268 Malvidae View MSA
124073002 5270 Rosid View MSA
123747230 5271 Pentapetalae View MSA
122795057 5272 Eudicot View MSA
122047062 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain