Gene : Carub.0007s0967 C. rubella v1.1

Defline:  (1 of 5) PTHR33286:SF1 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  967
Name:  ? Carub.0007s0967 Secondary Identifier:  ? PAC:39233004

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0967 0.5kb upstream 0.5kb upstream 1257 true scaffold_7: 3694871-3696127 Capsella rubella
Carub.0007s0967 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3695628-3696127 Capsella rubella
Carub.0007s0967 0.5kb downstream 0.5kb downstream 1257 true scaffold_7: 3694371-3695627 Capsella rubella
Carub.0007s0967 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3694371-3694870 Capsella rubella
Carub.0007s0967 1.0kb upstream 1.0kb upstream 1757 true scaffold_7: 3694871-3696627 Capsella rubella
Carub.0007s0967 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3695628-3696627 Capsella rubella
Carub.0007s0967 1.0kb downstream 1.0kb downstream 1757 true scaffold_7: 3693871-3695627 Capsella rubella
Carub.0007s0967 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3693871-3694870 Capsella rubella
Carub.0007s0967 2.0kb upstream 2.0kb upstream 2757 true scaffold_7: 3694871-3697627 Capsella rubella
Carub.0007s0967 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3695628-3697627 Capsella rubella
Carub.0007s0967 2.0kb downstream 2.0kb downstream 2757 true scaffold_7: 3692871-3695627 Capsella rubella
Carub.0007s0967 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3692871-3694870 Capsella rubella
Carub.0007s0967 5.0kb upstream 5.0kb upstream 5757 true scaffold_7: 3694871-3700627 Capsella rubella
Carub.0007s0967 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3695628-3700627 Capsella rubella
Carub.0007s0967 5.0kb downstream 5.0kb downstream 5757 true scaffold_7: 3689871-3695627 Capsella rubella
Carub.0007s0967 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3689871-3694870 Capsella rubella
Carub.0007s0967 10.0kb upstream 10.0kb upstream 10757 true scaffold_7: 3694871-3705627 Capsella rubella
Carub.0007s0967 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3695628-3705627 Capsella rubella
Carub.0007s0967 10.0kb downstream 10.0kb downstream 10757 true scaffold_7: 3684871-3695627 Capsella rubella
Carub.0007s0967 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3684871-3694870 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374686 5261 Brassicaceae View MSA
123836698 5264 Brassicales-Malvales View MSA
124341404 5266 SBM View MSA
124250886 5268 Malvidae View MSA
124071532 5270 Rosid View MSA
123738328 5271 Pentapetalae View MSA
122795695 5272 Eudicot View MSA
122051357 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain