Gene : Carub.0007s0977 C. rubella v1.1

Defline:  (1 of 2) PTHR31807//PTHR31807:SF2 - FAMILY NOT NAMED // HAUS AUGMIN-LIKE COMPLEX SUBUNIT 8 Genomic Order:  977
Name:  ? Carub.0007s0977 Secondary Identifier:  ? PAC:39233817

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0977 0.5kb upstream 0.5kb upstream 4839 true scaffold_7: 3721791-3726629 Capsella rubella
Carub.0007s0977 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3726130-3726629 Capsella rubella
Carub.0007s0977 0.5kb downstream 0.5kb downstream 4839 true scaffold_7: 3721291-3726129 Capsella rubella
Carub.0007s0977 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3721291-3721790 Capsella rubella
Carub.0007s0977 1.0kb upstream 1.0kb upstream 5339 true scaffold_7: 3721791-3727129 Capsella rubella
Carub.0007s0977 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3726130-3727129 Capsella rubella
Carub.0007s0977 1.0kb downstream 1.0kb downstream 5339 true scaffold_7: 3720791-3726129 Capsella rubella
Carub.0007s0977 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3720791-3721790 Capsella rubella
Carub.0007s0977 2.0kb upstream 2.0kb upstream 6339 true scaffold_7: 3721791-3728129 Capsella rubella
Carub.0007s0977 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3726130-3728129 Capsella rubella
Carub.0007s0977 2.0kb downstream 2.0kb downstream 6339 true scaffold_7: 3719791-3726129 Capsella rubella
Carub.0007s0977 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3719791-3721790 Capsella rubella
Carub.0007s0977 5.0kb upstream 5.0kb upstream 9339 true scaffold_7: 3721791-3731129 Capsella rubella
Carub.0007s0977 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3726130-3731129 Capsella rubella
Carub.0007s0977 5.0kb downstream 5.0kb downstream 9339 true scaffold_7: 3716791-3726129 Capsella rubella
Carub.0007s0977 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3716791-3721790 Capsella rubella
Carub.0007s0977 10.0kb upstream 10.0kb upstream 14339 true scaffold_7: 3721791-3736129 Capsella rubella
Carub.0007s0977 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3726130-3736129 Capsella rubella
Carub.0007s0977 10.0kb downstream 10.0kb downstream 14339 true scaffold_7: 3711791-3726129 Capsella rubella
Carub.0007s0977 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3711791-3721790 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365889 5261 Brassicaceae View MSA
123839278 5264 Brassicales-Malvales View MSA
124340911 5266 SBM View MSA
124248091 5268 Malvidae View MSA
124066469 5270 Rosid View MSA
123747481 5271 Pentapetalae View MSA
122790294 5272 Eudicot View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain