Gene : Carub.0007s1393 C. rubella v1.1
Defline:  (1 of 1) PTHR11214//PTHR11214:SF104 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED Genomic Order:  1393
Name:  ? Carub.0007s1393 Secondary Identifier:  ? PAC:39235082
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1393 0.5kb upstream 0.5kb upstream 3729 true scaffold_7: 5253457-5257185 Capsella rubella
Carub.0007s1393 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5253457-5253956 Capsella rubella
Carub.0007s1393 0.5kb downstream 0.5kb downstream 3729 true scaffold_7: 5253957-5257685 Capsella rubella
Carub.0007s1393 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5257186-5257685 Capsella rubella
Carub.0007s1393 1.0kb upstream 1.0kb upstream 4229 true scaffold_7: 5252957-5257185 Capsella rubella
Carub.0007s1393 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5252957-5253956 Capsella rubella
Carub.0007s1393 1.0kb downstream 1.0kb downstream 4229 true scaffold_7: 5253957-5258185 Capsella rubella
Carub.0007s1393 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5257186-5258185 Capsella rubella
Carub.0007s1393 2.0kb upstream 2.0kb upstream 5229 true scaffold_7: 5251957-5257185 Capsella rubella
Carub.0007s1393 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5251957-5253956 Capsella rubella
Carub.0007s1393 2.0kb downstream 2.0kb downstream 5229 true scaffold_7: 5253957-5259185 Capsella rubella
Carub.0007s1393 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5257186-5259185 Capsella rubella
Carub.0007s1393 5.0kb upstream 5.0kb upstream 8229 true scaffold_7: 5248957-5257185 Capsella rubella
Carub.0007s1393 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5248957-5253956 Capsella rubella
Carub.0007s1393 5.0kb downstream 5.0kb downstream 8229 true scaffold_7: 5253957-5262185 Capsella rubella
Carub.0007s1393 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5257186-5262185 Capsella rubella
Carub.0007s1393 10.0kb upstream 10.0kb upstream 13229 true scaffold_7: 5243957-5257185 Capsella rubella
Carub.0007s1393 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5243957-5253956 Capsella rubella
Carub.0007s1393 10.0kb downstream 10.0kb downstream 13229 true scaffold_7: 5253957-5267185 Capsella rubella
Carub.0007s1393 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5257186-5267185 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370578 5261 Brassicaceae View MSA
123836371 5264 Brassicales-Malvales View MSA
124348513 5266 SBM View MSA
124246736 5268 Malvidae View MSA
124072370 5270 Rosid View MSA
123747291 5271 Pentapetalae View MSA
122789444 5272 Eudicot View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain