Gene : Carub.0007s2912 C. rubella v1.1
Defline:  (1 of 1) K01703 - 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit (leuC) Genomic Order:  2912
Name:  ? Carub.0007s2912 Secondary Identifier:  ? PAC:39234194
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella BRANCHED-CHAIN-AA-SYN-PWY Capsella rubella pathologic  
Crubella LEUSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2912 0.5kb upstream 0.5kb upstream 4897 true scaffold_7: 11228679-11233575 Capsella rubella
Carub.0007s2912 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11228679-11229178 Capsella rubella
Carub.0007s2912 0.5kb downstream 0.5kb downstream 4897 true scaffold_7: 11229179-11234075 Capsella rubella
Carub.0007s2912 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 11233576-11234075 Capsella rubella
Carub.0007s2912 1.0kb upstream 1.0kb upstream 5397 true scaffold_7: 11228179-11233575 Capsella rubella
Carub.0007s2912 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11228179-11229178 Capsella rubella
Carub.0007s2912 1.0kb downstream 1.0kb downstream 5397 true scaffold_7: 11229179-11234575 Capsella rubella
Carub.0007s2912 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 11233576-11234575 Capsella rubella
Carub.0007s2912 2.0kb upstream 2.0kb upstream 6397 true scaffold_7: 11227179-11233575 Capsella rubella
Carub.0007s2912 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11227179-11229178 Capsella rubella
Carub.0007s2912 2.0kb downstream 2.0kb downstream 6397 true scaffold_7: 11229179-11235575 Capsella rubella
Carub.0007s2912 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 11233576-11235575 Capsella rubella
Carub.0007s2912 5.0kb upstream 5.0kb upstream 9397 true scaffold_7: 11224179-11233575 Capsella rubella
Carub.0007s2912 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11224179-11229178 Capsella rubella
Carub.0007s2912 5.0kb downstream 5.0kb downstream 9397 true scaffold_7: 11229179-11238575 Capsella rubella
Carub.0007s2912 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 11233576-11238575 Capsella rubella
Carub.0007s2912 10.0kb upstream 10.0kb upstream 14397 true scaffold_7: 11219179-11233575 Capsella rubella
Carub.0007s2912 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 11219179-11229178 Capsella rubella
Carub.0007s2912 10.0kb downstream 10.0kb downstream 14397 true scaffold_7: 11229179-11243575 Capsella rubella
Carub.0007s2912 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 11233576-11243575 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376626 5261 Brassicaceae View MSA
123838353 5264 Brassicales-Malvales View MSA
124346473 5266 SBM View MSA
124238803 5268 Malvidae View MSA
124064281 5270 Rosid View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain