Gene : Carub.0007s2565 C. rubella v1.1

Defline:  (1 of 77) PTHR32410//PTHR32410:SF152 - FAMILY NOT NAMED // C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2565
Name:  ? Carub.0007s2565 Secondary Identifier:  ? PAC:39234421

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2565 0.5kb upstream 0.5kb upstream 2447 true scaffold_7: 9758519-9760965 Capsella rubella
Carub.0007s2565 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9760466-9760965 Capsella rubella
Carub.0007s2565 0.5kb downstream 0.5kb downstream 2447 true scaffold_7: 9758019-9760465 Capsella rubella
Carub.0007s2565 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9758019-9758518 Capsella rubella
Carub.0007s2565 1.0kb upstream 1.0kb upstream 2947 true scaffold_7: 9758519-9761465 Capsella rubella
Carub.0007s2565 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9760466-9761465 Capsella rubella
Carub.0007s2565 1.0kb downstream 1.0kb downstream 2947 true scaffold_7: 9757519-9760465 Capsella rubella
Carub.0007s2565 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9757519-9758518 Capsella rubella
Carub.0007s2565 2.0kb upstream 2.0kb upstream 3947 true scaffold_7: 9758519-9762465 Capsella rubella
Carub.0007s2565 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9760466-9762465 Capsella rubella
Carub.0007s2565 2.0kb downstream 2.0kb downstream 3947 true scaffold_7: 9756519-9760465 Capsella rubella
Carub.0007s2565 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9756519-9758518 Capsella rubella
Carub.0007s2565 5.0kb upstream 5.0kb upstream 6947 true scaffold_7: 9758519-9765465 Capsella rubella
Carub.0007s2565 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9760466-9765465 Capsella rubella
Carub.0007s2565 5.0kb downstream 5.0kb downstream 6947 true scaffold_7: 9753519-9760465 Capsella rubella
Carub.0007s2565 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9753519-9758518 Capsella rubella
Carub.0007s2565 10.0kb upstream 10.0kb upstream 11947 true scaffold_7: 9758519-9770465 Capsella rubella
Carub.0007s2565 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9760466-9770465 Capsella rubella
Carub.0007s2565 10.0kb downstream 10.0kb downstream 11947 true scaffold_7: 9748519-9760465 Capsella rubella
Carub.0007s2565 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9748519-9758518 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375757 5261 Brassicaceae View MSA
123801045 5264 Brassicales-Malvales View MSA
124298390 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain