Gene : Carub.0007s2614 C. rubella v1.1
Defline:  (1 of 9) PTHR10168//PTHR10168:SF115 - GLUTAREDOXIN // MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  2614
Name:  ? Carub.0007s2614 Secondary Identifier:  ? PAC:39232974
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2614 0.5kb upstream 0.5kb upstream 791 true scaffold_7: 9908666-9909456 Capsella rubella
Carub.0007s2614 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9908957-9909456 Capsella rubella
Carub.0007s2614 0.5kb downstream 0.5kb downstream 791 true scaffold_7: 9908166-9908956 Capsella rubella
Carub.0007s2614 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9908166-9908665 Capsella rubella
Carub.0007s2614 1.0kb upstream 1.0kb upstream 1291 true scaffold_7: 9908666-9909956 Capsella rubella
Carub.0007s2614 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9908957-9909956 Capsella rubella
Carub.0007s2614 1.0kb downstream 1.0kb downstream 1291 true scaffold_7: 9907666-9908956 Capsella rubella
Carub.0007s2614 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9907666-9908665 Capsella rubella
Carub.0007s2614 2.0kb upstream 2.0kb upstream 2291 true scaffold_7: 9908666-9910956 Capsella rubella
Carub.0007s2614 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9908957-9910956 Capsella rubella
Carub.0007s2614 2.0kb downstream 2.0kb downstream 2291 true scaffold_7: 9906666-9908956 Capsella rubella
Carub.0007s2614 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9906666-9908665 Capsella rubella
Carub.0007s2614 5.0kb upstream 5.0kb upstream 5291 true scaffold_7: 9908666-9913956 Capsella rubella
Carub.0007s2614 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9908957-9913956 Capsella rubella
Carub.0007s2614 5.0kb downstream 5.0kb downstream 5291 true scaffold_7: 9903666-9908956 Capsella rubella
Carub.0007s2614 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9903666-9908665 Capsella rubella
Carub.0007s2614 10.0kb upstream 10.0kb upstream 10291 true scaffold_7: 9908666-9918956 Capsella rubella
Carub.0007s2614 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9908957-9918956 Capsella rubella
Carub.0007s2614 10.0kb downstream 10.0kb downstream 10291 true scaffold_7: 9898666-9908956 Capsella rubella
Carub.0007s2614 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9898666-9908665 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380228 5261 Brassicaceae View MSA
123802610 5264 Brassicales-Malvales View MSA
124299792 5266 SBM View MSA
124151116 5268 Malvidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain