Gene : Carub.0007s3100 C. rubella v1.1
Defline:  (1 of 2) PTHR23359:SF72 - ADENYLATE KINASE FAMILY PROTEIN Genomic Order:  3100
Name:  ? Carub.0007s3100 Secondary Identifier:  ? PAC:39233208
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6126 Capsella rubella pathologic  
Crubella PWY-7219 Capsella rubella pathologic  
Crubella PWY-7229 Capsella rubella pathologic  
Crubella PWY-841 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3100 0.5kb upstream 0.5kb upstream 5180 true scaffold_7: 13557167-13562346 Capsella rubella
Carub.0007s3100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 13557167-13557666 Capsella rubella
Carub.0007s3100 0.5kb downstream 0.5kb downstream 5180 true scaffold_7: 13557667-13562846 Capsella rubella
Carub.0007s3100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13562347-13562846 Capsella rubella
Carub.0007s3100 1.0kb upstream 1.0kb upstream 5680 true scaffold_7: 13556667-13562346 Capsella rubella
Carub.0007s3100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 13556667-13557666 Capsella rubella
Carub.0007s3100 1.0kb downstream 1.0kb downstream 5680 true scaffold_7: 13557667-13563346 Capsella rubella
Carub.0007s3100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13562347-13563346 Capsella rubella
Carub.0007s3100 2.0kb upstream 2.0kb upstream 6680 true scaffold_7: 13555667-13562346 Capsella rubella
Carub.0007s3100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 13555667-13557666 Capsella rubella
Carub.0007s3100 2.0kb downstream 2.0kb downstream 6680 true scaffold_7: 13557667-13564346 Capsella rubella
Carub.0007s3100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13562347-13564346 Capsella rubella
Carub.0007s3100 5.0kb upstream 5.0kb upstream 9680 true scaffold_7: 13552667-13562346 Capsella rubella
Carub.0007s3100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 13552667-13557666 Capsella rubella
Carub.0007s3100 5.0kb downstream 5.0kb downstream 9680 true scaffold_7: 13557667-13567346 Capsella rubella
Carub.0007s3100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13562347-13567346 Capsella rubella
Carub.0007s3100 10.0kb upstream 10.0kb upstream 14680 true scaffold_7: 13547667-13562346 Capsella rubella
Carub.0007s3100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 13547667-13557666 Capsella rubella
Carub.0007s3100 10.0kb downstream 10.0kb downstream 14680 true scaffold_7: 13557667-13572346 Capsella rubella
Carub.0007s3100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13562347-13572346 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366250 5261 Brassicaceae View MSA
123830749 5264 Brassicales-Malvales View MSA
124343511 5266 SBM View MSA
124239861 5268 Malvidae View MSA
124068870 5270 Rosid View MSA
123737184 5271 Pentapetalae View MSA
122791029 5272 Eudicot View MSA
122042367 5273 Angiosperm View MSA
121351726 5274 Embryophyte View MSA
123426027 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain