Gene : Carub.0007s2872 C. rubella v1.1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2872
Name:  ? Carub.0007s2872 Secondary Identifier:  ? PAC:39234462
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2872 0.5kb upstream 0.5kb upstream 4678 true scaffold_7: 10999361-11004038 Capsella rubella
Carub.0007s2872 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11003539-11004038 Capsella rubella
Carub.0007s2872 0.5kb downstream 0.5kb downstream 4678 true scaffold_7: 10998861-11003538 Capsella rubella
Carub.0007s2872 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10998861-10999360 Capsella rubella
Carub.0007s2872 1.0kb upstream 1.0kb upstream 5178 true scaffold_7: 10999361-11004538 Capsella rubella
Carub.0007s2872 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11003539-11004538 Capsella rubella
Carub.0007s2872 1.0kb downstream 1.0kb downstream 5178 true scaffold_7: 10998361-11003538 Capsella rubella
Carub.0007s2872 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 10998361-10999360 Capsella rubella
Carub.0007s2872 2.0kb upstream 2.0kb upstream 6178 true scaffold_7: 10999361-11005538 Capsella rubella
Carub.0007s2872 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11003539-11005538 Capsella rubella
Carub.0007s2872 2.0kb downstream 2.0kb downstream 6178 true scaffold_7: 10997361-11003538 Capsella rubella
Carub.0007s2872 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 10997361-10999360 Capsella rubella
Carub.0007s2872 5.0kb upstream 5.0kb upstream 9178 true scaffold_7: 10999361-11008538 Capsella rubella
Carub.0007s2872 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11003539-11008538 Capsella rubella
Carub.0007s2872 5.0kb downstream 5.0kb downstream 9178 true scaffold_7: 10994361-11003538 Capsella rubella
Carub.0007s2872 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 10994361-10999360 Capsella rubella
Carub.0007s2872 10.0kb upstream 10.0kb upstream 14178 true scaffold_7: 10999361-11013538 Capsella rubella
Carub.0007s2872 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 11003539-11013538 Capsella rubella
Carub.0007s2872 10.0kb downstream 10.0kb downstream 14178 true scaffold_7: 10989361-11003538 Capsella rubella
Carub.0007s2872 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 10989361-10999360 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362629 5261 Brassicaceae View MSA
123841303 5264 Brassicales-Malvales View MSA
124336454 5266 SBM View MSA
124246260 5268 Malvidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain